Parameterized Algorithms for Generalized Domination. - Venkatesh Raman 001; Saket Saurabh 001; Sriganesh Srihari (COCOA, 2008)

Detecting hubs and quasi cliques in scale-free networks. - Sriganesh Srihari; Hoong Kee Ng; Kang Ning 001; Hon Wai Leong (ICPR, 2008)

A Framework for SQL-Based Mining of Large Graphs on Relational Databases. - Sriganesh Srihari; Shruti Chandrashekar; Srinivasan Parthasarathy 001 (PAKDD (2), 2010)

Examination of the relationship between essential genes in PPI network and hub proteins in reverse nearest neighbor topology. - Kang Ning 001; Hoong Kee Ng; Sriganesh Srihari; Hon Wai Leong; Alexey I. Nesvizhskii (BMC Bioinform., 2010)

MCL-CAw: a refinement of MCL for detecting yeast complexes from weighted PPI networks by incorporating core-attachment structure. - Sriganesh Srihari; Kang Ning 001; Hon Wai Leong (BMC Bioinform., 2010)

Temporal dynamics of protein complexes in PPI Networks: a case study using yeast cell cycle dynamics. - Sriganesh Srihari; Hon Wai Leong (BMC Bioinform., 2012)

Employing functional interactions for characterisation and detection of sparse complexes from yeast PPI networks. - Sriganesh Srihari; Hon Wai Leong (Int. J. Bioinform. Res. Appl., 2012)

Systematic tracking of dysregulated modules identifies novel genes in cancer. - Sriganesh Srihari; Mark A. Ragan (Bioinform., 2013)

Identifying conserved protein complexes between species by constructing interolog networks. - Phi-Vu Nguyen; Sriganesh Srihari; Hon Wai Leong (BMC Bioinform., 2013)

Employing functional interactions for characterization and detection of sparse complexes from yeast PPI networks - Sriganesh Srihari; Hon Wai Leong (CoRR, 2013)

Computing Pathways to Systems Biology: Key Contributions of Computational Methods in Pathway Identification - Sriganesh Srihari; Mark A. Ragan (CoRR, 2013)

A Survey of Computational Methods for protein Complex Prediction from protein Interaction Networks. - Sriganesh Srihari; Hon Wai Leong (J. Bioinform. Comput. Biol., 2013)

Complex-based analysis of dysregulated cellular processes in cancer. - Sriganesh Srihari; Piyush B. Madhamshettiwar; Sarah Song; Chao Liu; Peter T. Simpson; Kum Khanna; Mark A. Ragan (BMC Syst. Biol., 2014)

Evolution and Controllability of CancerNetworks: A Boolean Perspective. - Sriganesh Srihari; Venkatesh Raman 001; Hon Wai Leong; Mark A. Ragan (IEEE ACM Trans. Comput. Biol. Bioinform., 2014)

Breast cancer classification: linking molecular mechanisms to disease prognosis. - Atefeh Taherian Fard; Sriganesh Srihari; Mark A. Ragan (Briefings Bioinform., 2015)

Parameterized Algorithms for Clustering PPI Networks. - Sriganesh Srihari; Hon Wai Leong (CoRR, 2015)

EnzDP: Improved enzyme annotation for metabolic network reconstruction based on domain composition profiles. - Nam-Ninh Nguyen; Sriganesh Srihari; Hon Wai Leong; Ket Fah Chong (J. Bioinform. Comput. Biol., 2015)

Identifying collateral and synthetic lethal vulnerabilities within the DNA-damage response. - Pietro Pinoli; Sriganesh Srihari; Limsoon Wong; Stefano Ceri (BMC Bioinform., 2021)