A Disorder-Induced Domino-Like Destabilization Mechanism Governs the Folding and Functional Dynamics of the Repeat Protein IκBα. - Srinivasan Sivanandan; Athi N. Naganathan (PLoS Comput. Biol., 2013)

Automated detection and segmentation of follicles in 3D ultrasound for assisted reproduction. - Nikhil S. Narayan; Srinivasan Sivanandan; Srinivas Kudavelly; Kedar A. Patwardhan; G. A. Ramaraju (Computer-Aided Diagnosis, 2018)

Automated measurement of fetal right-myocardial performance index from pulsed wave Doppler spectrum. - Rahul Suresh; Srinivasan Sivanandan; Nitin Singhal; JinYong Lee; Mi-Young Lee; Hye-Sung Won (Computer-Aided Diagnosis, 2019)

Dyna-AIL : Adversarial Imitation Learning by Planning. - Vaibhav Saxena; Srinivasan Sivanandan; Pulkit Mathur (CoRR, 2019)

Channel Vision Transformers: An Image Is Worth C x 16 x 16 Words. - Yujia Bao; Srinivasan Sivanandan; Theofanis Karaletsos (CoRR, 2023)

Channel Vision Transformers: An Image Is Worth 1 x 16 x 16 Words. - Yujia Bao; Srinivasan Sivanandan; Theofanis Karaletsos (ICLR, 2024)

Fast Vision Mamba: Pooling Spatial Dimensions for Accelerated Processing. - Saarthak Kapse; Robin Betz; Srinivasan Sivanandan (CoRR, 2025)

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop. - Elizabeth Fahsbender; Alma Andersson; Jeremy Ash; Polina Binder; Daniel Burkhardt; Benjamin Chang; Georg K. Gerber; Anthony Gitter; Patrick Godau; Ankit Gupta; Genevieve Haliburton; Siyu He; et al. (CoRR, 2025)