Sensitivity, principal component and flux analysis applied to signal transduction: the case of epidermal growth factor mediated signaling. - Gang Liu; Mark T. Swihart; Sriram Neelamegham (Bioinform., 2005)

Systems-level modeling of cellular glycosylation reaction networks: O-linked glycan formation on natural selectin ligands. - Gang Liu; Dhananjay D. Marathe; Khushi L. Matta; Sriram Neelamegham (Bioinform., 2008)

In silico Biochemical Reaction Network Analysis (IBRENA): a package for simulation and analysis of reaction networks. - Gang Liu; Sriram Neelamegham (Bioinform., 2008)

Glycosylation Network Analysis Toolbox: a MATLAB-based environment for systems glycobiology. - Gang Liu; Apurv Puri; Sriram Neelamegham (Bioinform., 2013)

DrawGlycan-SNFG and gpAnnotate: rendering glycans and annotating glycopeptide mass spectra. - Kai Cheng; Gabrielle Pawlowski; Xinheng Yu; Yusen Zhou; Sriram Neelamegham (Bioinform., 2020)

GlycoEnzOnto: a GlycoEnzyme pathway and molecular function ontology. - Theodore Groth; Alexander D. Diehl; Rudiyanto Gunawan; Sriram Neelamegham (Bioinform., 2022)

Functional implications of glycans and their curation: insights from the workshop held at the 16th Annual International Biocuration Conference in Padua, Italy. - Karina Martinez; Jon Agirre; Yukie Akune; Kiyoko F. Aoki-Kinoshita; Cecilia N. Arighi; Kristian B. Axelsen; Evan Bolton; Emily Bordeleau; Nathan J. Edwards; Elisa Fadda; Ten Feizi; Catherine A. Hayes; et al. (Database J. Biol. Databases Curation, 2024)