The National Center for Biotechnology Information's Protein Clusters Database. - William Klimke; Richa Agarwala; Azat Badretdin; Slava Chetvernin; Stacy Ciufo; Boris Fedorov; Boris Kiryutin; Kathleen O'Neill; Wolfgang Resch; Sergei Resenchuk; Susan Schafer; Igor Tolstoy; et al. (Nucleic Acids Res., 2009)

RefSeq microbial genomes database: new representation and annotation strategy. - Tatiana A. Tatusova; Stacy Ciufo; Boris Fedorov; Kathleen O'Neill; Igor Tolstoy (Nucleic Acids Res., 2014)

Update on RefSeq microbial genomes resources. - Tatiana A. Tatusova; Stacy Ciufo; Scott Federhen; Boris Fedorov; Richard McVeigh; Kathleen O'Neill; Igor Tolstoy; Leonid Zaslavsky (Nucleic Acids Res., 2015)

From data repositories to submission portals: rethinking the role of domain-specific databases in CollecTF. - Sefa Kiliç; Dinara M. Sagitova; Shoshannah Wolfish; Benoit Bely; Mélanie Courtot; Stacy Ciufo; Tatiana A. Tatusova; Claire O'Donovan; Marcus C. Chibucos; Maria Jesus Martin; Ivan Erill (Database J. Biol. Databases Curation, 2016)

Clustering analysis of proteins from microbial genomes at multiple levels of resolution. - Leonid Zaslavsky; Stacy Ciufo; Boris Fedorov; Tatiana A. Tatusova (BMC Bioinform., 2016)

Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation. - Nuala A. O'Leary; Mathew W. Wright; J. Rodney Brister; Stacy Ciufo; Diana Haddad; Richard McVeigh; Bhanu Rajput; Barbara Robbertse; Brian Smith-White; Danso Ako-Adjei; Alexander Astashyn; Azat Badretdin; et al. (Nucleic Acids Res., 2016)

Improving taxonomic accuracy for fungi in public sequence databases: applying 'one name one species' in well-defined genera with Trichoderma/Hypocrea as a test case. - Barbara Robbertse; Pooja K. Strope; Priscila Chaverri; Romina Gazis; Stacy Ciufo; Michael Domrachev; Conrad L. Schoch (Database J. Biol. Databases Curation, 2017)

The NCBI BioCollections Database. - Shobha Sharma; Stacy Ciufo; Elena Starchenko; Dakshesh Darji; Larry Chlumsky; Ilene Karsch-Mizrachi; Conrad L. Schoch (Database J. Biol. Databases Curation, 2019)

NCBI Taxonomy: a comprehensive update on curation, resources and tools. - Conrad L. Schoch; Stacy Ciufo; Michael Domrachev; Carol L. Hotton; Sivakumar Kannan; Rogneda Khovanskaya; Detlef Leipe; Richard McVeigh; Kathleen O'Neill; Barbara Robbertse; Shobha Sharma; Vladimir Soussov; et al. (Database J. Biol. Databases Curation, 2020)