Similarities of Ordered Gene Lists. - Xinan Yang; Stefan Bentink; Stefanie Scheid; Rainer Spang (J. Bioinform. Comput. Biol., 2006)

Detecting hierarchical structure in molecular characteristics of disease using transitive approximations of directed graphs. - Juby Jacob; Marcel Jentsch; Dennis Kostka; Stefan Bentink; Rainer Spang (Bioinform., 2008)

Transcriptional profiling of aggressive lymphoma (Transkriptionelle Charakterisierung von aggressiven Lymphomen) - Stefan Bentink (2010)

iBBiG: iterative binary bi-clustering of gene sets. - Daniel Gusenleitner; Eleanor Howe; Stefan Bentink; John Quackenbush; Aedín C. Culhane (Bioinform., 2012)