Forna (force-directed RNA): Simple and effective online RNA secondary structure diagrams. - Peter Kerpedjiev; Stefan Hammer; Ivo L. Hofacker (Bioinform., 2015)

Analytical derivation of controller parameters for series connected LCC multiterminal HVDC systems through the use of a decoupling filter. - Stefan Hammer; Christoph Hahn; Matthias Luther (ISGT, 2017)

RNAblueprint: flexible multiple target nucleic acid sequence design. - Stefan Hammer; Birgit Tschiatschek; Christoph Flamm; Ivo L. Hofacker; Sven Findeiß (Bioinform., 2017)

Fixed-parameter tractable sampling for RNA design with multiple target structures. - Stefan Hammer; Wei Wang 263; Sebastian Will; Yann Ponty (BMC Bioinform., 2019)

Wiener, edge-Wiener, and vertex-edge-Wiener index of Basilica graphs. - Matteo Cavaleri; Daniele D'Angeli; Alfredo Donno; Stefan Hammer (Discret. Appl. Math., 2022)

Comparing Wiener, Szeged and revised Szeged index on cactus graphs. - Stefan Hammer (Ars Math. Contemp., 2023)

DrForna: visualization of cotranscriptional folding. - Anda Ramona Tanasie; Peter Kerpedjiev; Stefan Hammer; Stefan Badelt (Bioinform., 2023)