Stefan Klein
Orcid: 0000-0003-4449-6784Affiliations:
- Erasmus MC, Departments of Radiology and Medical Informatics, Rotterdam, The Netherlands
According to our database1,
Stefan Klein
authored at least 137 papers
between 2005 and 2024.
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Bibliography
2024
Evaluating the Predictive Value of Glioma Growth Models for Low-Grade Glioma After Tumor Resection.
IEEE Trans. Medical Imaging, January, 2024
Minimally Interactive Segmentation of Soft-Tissue Tumors on CT and MRI using Deep Learning.
CoRR, 2024
2023
Comput. Medical Imaging Graph., September, 2023
NeuroImage, April, 2023
Data synthesis and adversarial networks: A review and meta-analysis in cancer imaging.
Medical Image Anal., 2023
Comparison of different retinal regions-of-interest imaged by OCT for the classification of intermediate AMD.
CoRR, 2023
An Interpretable Machine Learning Model with Deep Learning-Based Imaging Biomarkers for Diagnosis of Alzheimer's Disease.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023 Workshops, 2023
2022
NeuroImage, 2022
Medical Image Anal., 2022
Differential Diagnosis and Molecular Stratification of Gastrointestinal Stromal Tumors on CT Images Using a Radiomics Approach.
J. Digit. Imaging, 2022
Multi-Atlas Segmentation and Spatial Alignment of the Human Embryo in First Trimester 3D Ultrasound.
CoRR, 2022
Automatic Segmentation of the Optic Nerve Head Region in Optical Coherence Tomography: A Methodological Review.
Comput. Methods Programs Biomed., 2022
Towards a 4D Spatio-Temporal Atlas of the Embryonic and Fetal Brain Using a Deep Learning Approach for Groupwise Image Registration.
Proceedings of the Biomedical Image Registration - 10th International Workshop, 2022
Motion correction in retinal optical coherence tomography imaging using deep learning registration.
Proceedings of the Medical Imaging 2022: Image Processing, 2022
2021
DeepDicomSort: An Automatic Sorting Algorithm for Brain Magnetic Resonance Imaging Data.
Neuroinformatics, 2021
Progression along data-driven disease timelines is predictive of Alzheimer's disease in a population-based cohort.
NeuroImage, 2021
Analyzing the effect of <i>APOE</i> on Alzheimer's disease progression using an event-based model for stratified populations.
NeuroImage, 2021
Longitudinal diffusion MRI analysis using Segis-Net: A single-step deep-learning framework for simultaneous segmentation and registration.
NeuroImage, 2021
Medical Image Anal., 2021
Differences Between MR Brain Region Segmentation Methods: Impact on Single-Subject Analysis.
Frontiers Big Data, 2021
Reproducible radiomics through automated machine learning validated on twelve clinical applications.
CoRR, 2021
A Review of Generative Adversarial Networks in Cancer Imaging: New Applications, New Solutions.
CoRR, 2021
Learning unbiased group-wise registration (LUGR) and joint segmentation: evaluation on longitudinal diffusion MRI.
Proceedings of the Medical Imaging 2021: Image Processing, Online, February 15-19, 2021, 2021
The Effect of Preprocessing on Convolutional Neural Networks for Medical Image Segmentation.
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021
Proceedings of the Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2021
2020
An Efficient Method for Multi-Parameter Mapping in Quantitative MRI Using B-Spline Interpolation.
IEEE Trans. Medical Imaging, 2020
Cross-Cohort Generalizability of Deep and Conventional Machine Learning for MRI-based Diagnosis and Prediction of Alzheimer's Disease.
CoRR, 2020
Learning unbiased registration and joint segmentation: evaluation on longitudinal diffusion MRI.
CoRR, 2020
WHO 2016 subtyping and automated segmentation of glioma using multi-task deep learning.
CoRR, 2020
Analyzing the effect of APOE on Alzheimer's disease progression using an event-based model for stratified populations.
CoRR, 2020
Towards Segmentation and Spatial Alignment of the Human Embryonic Brain Using Deep Learning for Atlas-Based Registration.
Proceedings of the Biomedical Image Registration - 9th International Workshop, 2020
Proceedings of the International Conference on Medical Imaging with Deep Learning, 2020
Atlas-Based Segmentation of the Human Embryo Using Deep Learning with Minimal Supervision.
Proceedings of the Medical Ultrasound, and Preterm, Perinatal and Paediatric Image Analysis, 2020
Proceedings of the Medical Imaging 2020: Biomedical Applications in Molecular, 2020
2019
Disease progression timeline estimation for Alzheimer's disease using discriminative event based modeling.
NeuroImage, 2019
Towards continuous learning for glioma segmentation with elastic weight consolidation.
CoRR, 2019
Proceedings of the Machine Learning for Medical Image Reconstruction, 2019
TADPOLE Challenge: Accurate Alzheimer's Disease Prediction Through Crowdsourced Forecasting of Future Data.
Proceedings of the Predictive Intelligence in Medicine - Second International Workshop, 2019
A Hybrid Deep Learning Framework for Integrated Segmentation and Registration: Evaluation on Longitudinal White Matter Tract Changes.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019
Multi-modal Segmentation with Missing MR Sequences Using Pre-trained Fusion Networks.
Proceedings of the Domain Adaptation and Representation Transfer and Medical Image Learning with Less Labels and Imperfect Data, 2019
Classification Of Prostate Cancer: High Grade Versus Low Grade Using A Radiomics Approach.
Proceedings of the 16th IEEE International Symposium on Biomedical Imaging, 2019
The Continuous Registration Challenge: Evaluation-as-a-Service for Medical Image Registration Algorithms.
Proceedings of the 16th IEEE International Symposium on Biomedical Imaging, 2019
Event-Based Modeling with High-Dimensional Imaging Biomarkers for Estimating Spatial Progression of Dementia.
Proceedings of the Information Processing in Medical Imaging, 2019
2018
Intrasubject multimodal groupwise registration with the conditional template entropy.
Medical Image Anal., 2018
Disease Progression Timeline Estimation for Alzheimer's Disease using Discriminative Event Based Modeling.
CoRR, 2018
Proceedings of the Biomedical Image Registration - 8th International Workshop, 2018
Averaged Stochastic Optimization for Medical Image Registration Based on Variance Reduction.
Proceedings of the Biomedical Image Registration - 8th International Workshop, 2018
Proceedings of the Medical Imaging 2018: Image Processing, 2018
2017
IEEE Trans. Pattern Anal. Mach. Intell., 2017
Medical Image Anal., 2017
Comput. methods Biomech. Biomed. Eng. Imaging Vis., 2017
Proceedings of the Medical Imaging 2017: Image Processing, 2017
Proceedings of the Medical Imaging 2017: Image Processing, 2017
Parameter Sensitivity Analysis in Medical Image Registration Algorithms Using Polynomial Chaos Expansions.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017
Proceedings of the 14th IEEE International Symposium on Biomedical Imaging, 2017
Proceedings of the Information Processing in Medical Imaging, 2017
2016
Medical Image Anal., 2016
Semi-automated registration of pre- and intra-operative liver CT for image-guided interventions.
Proceedings of the Medical Imaging 2016: Image Processing, 2016
Proceedings of the Medical Imaging 2016: Biomedical Applications in Molecular, Structural, and Functional Imaging, San Diego, California, United States, 27 February, 2016
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016
SimpleElastix: A User-Friendly, Multi-lingual Library for Medical Image Registration.
Proceedings of the 2016 IEEE Conference on Computer Vision and Pattern Recognition Workshops, 2016
Proceedings of the 2016 IEEE Conference on Computer Vision and Pattern Recognition Workshops, 2016
The Design of SuperElastix - A Unifying Framework for a Wide Range of Image Registration Methodologies.
Proceedings of the 2016 IEEE Conference on Computer Vision and Pattern Recognition Workshops, 2016
2015
Detecting Statistically Significant Differences in Quantitative MRI Experiments, Applied to Diffusion Tensor Imaging.
IEEE Trans. Medical Imaging, 2015
Lumen Segmentation and Motion Estimation in B-Mode and Contrast-Enhanced Ultrasound Images of the Carotid Artery in Patients With Atherosclerotic Plaque.
IEEE Trans. Medical Imaging, 2015
IEEE J. Biomed. Health Informatics, 2015
Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, 2015
Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, 2015
2014
Proceedings of the Biomedical Image Registration - 6th International Workshop, 2014
Proceedings of the Biomedical Image Registration - 6th International Workshop, 2014
Proceedings of the Biomedical Image Registration - 6th International Workshop, 2014
Proceedings of the Medical Imaging 2014: Image Processing, 2014
Influence of image registration on ADC images computed from free-breathing diffusion MRIs of the abdomen.
Proceedings of the Medical Imaging 2014: Image Processing, 2014
Nonrigid motion compensation in B-mode and contrast enhanced ultrasound image sequences of the carotid artery.
Proceedings of the Medical Imaging 2014: Image Processing, 2014
Atherosclerotic carotid lumen segmentation in combined B-mode and contrast enhanced ultrasound images.
Proceedings of the Medical Imaging 2014: Image Processing, 2014
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014
Proceedings of the Machine Learning in Medical Imaging - 5th International Workshop, 2014
2013
IEEE Trans. Medical Imaging, 2013
IEEE Trans. Image Process., 2013
Improving alignment in Tract-based spatial statistics: Evaluation and optimization of image registration.
NeuroImage, 2013
Automatic carotid artery distensibility measurements from CTA using nonrigid registration.
Medical Image Anal., 2013
Fast Parallel Image Registration on CPU and GPU for Diagnostic Classification of Alzheimer's Disease.
Frontiers Neuroinformatics, 2013
Proceedings of the Medical Imaging 2013: Image Processing, 2013
Carotid Artery Lumen Segmentation in 3D Free-Hand Ultrasound Images Using Surface Graph Cuts.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013
Groupwise Registration for Correcting Subject Motion and Eddy Current Distortions in Diffusion MRI Using a PCA Based Dissimilarity Metric.
Proceedings of the Computational Diffusion MRI and Brain Connectivity, 2013
Segmentation of 3D Transesophageal Echocardiograms by Multi-cavity Active Shape Model and Gamma Mixture Model.
Proceedings of the Augmented Reality Environments for Medical Imaging and Computer-Assisted Interventions, 2013
Validation of a non-rigid registration method for motion compensation in 4D ultrasound of the liver.
Proceedings of the 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2013
2012
IEEE Trans. Medical Imaging, 2012
Automated Brain Structure Segmentation Based on Atlas Registration and Appearance Models.
IEEE Trans. Medical Imaging, 2012
Semiautomatic carotid lumen segmentation for quantification of lumen geometry in multispectral MRI.
Medical Image Anal., 2012
Medical Image Anal., 2012
Cardiac motion-corrected iterative cone-beam CT reconstruction using a semi-automatic minimum cost path-based coronary centerline extraction.
Comput. Medical Imaging Graph., 2012
Estimating 3D lumen centerlines of carotid arteries in free-hand acquisition ultrasound.
Int. J. Comput. Assist. Radiol. Surg., 2012
Hierarchical vs. Simultaneous Multiresolution Strategies for Nonrigid Image Registration.
Proceedings of the Biomedical Image Registration - 5th International Workshop, 2012
Registration of Free-Hand Ultrasound and MRI of Carotid Arteries through Combination of Point-Based and Intensity-Based Algorithms.
Proceedings of the Biomedical Image Registration - 5th International Workshop, 2012
Proceedings of the Medical Imaging 2012: Image Processing, 2012
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012
Proceedings of the Artificial Neural Networks and Machine Learning - ICANN 2012, 2012
2011
IEEE Trans. Medical Imaging, 2011
Semi-automatic construction of reference standards for evaluation of image registration.
Medical Image Anal., 2011
Nonrigid registration of dynamic medical imaging data using nD + t B-splines and a groupwise optimization approach.
Medical Image Anal., 2011
Proceedings of the Medical Imaging 2011: Image Processing, 2011
Evaluation of optimization methods for intensity-based 2D-3D registration in x-ray guided interventions.
Proceedings of the Medical Imaging 2011: Image Processing, 2011
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011, 2011
Proceedings of the Augmented Environments for Computer-Assisted Interventions, 2011
Preconditioned Stochastic Gradient Descent Optimisation for Monomodal Image Registration.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011, 2011
Plaque characterization in ex vivo MRI evaluated by dense 3D correspondence with histology.
Proceedings of the Medical Imaging 2011: Computer-Aided Diagnosis, 2011
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011
2010
IEEE Trans. Medical Imaging, 2010
Adaptive local multi-atlas segmentation: Application to the heart and the caudate nucleus.
Medical Image Anal., 2010
Proceedings of the Medical Imaging 2010: Image Processing, 2010
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2010
Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010
Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010
Automated carotid artery distensibility measurements from CTA using nonrigid registration.
Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010
2009
IEEE Trans. Medical Imaging, 2009
Int. J. Comput. Vis., 2009
Patient Specific 4D Coronary Models from ECG-gated CTA Data for Intra-operative Dynamic Alignment of CTA with X-ray Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2009
Iterative Co-linearity Filtering and Parameterization of Fiber Tracts in the Entire Cingulum.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2009
GPU Accelerated Alignment of 3-D CTA with 2-D X-Ray Data for Improved Guidance in Coronary Interventions.
Proceedings of the 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28, 2009
Cerebellum Segmentation in MRI Using Atlas Registration and Local Multi-Scale Image Descriptors.
Proceedings of the 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28, 2009
2008
Adaptive local multi-atlas segmentation: application to heart segmentation in chest CT scans.
Proceedings of the Medical Imaging 2008: Image Processing, 2008
Semi-automatic Reference Standard Construction for Quantitative Evaluation of Lung CT Registration.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2008
2007
Evaluation of Optimization Methods for Nonrigid Medical Image Registration Using Mutual Information and B-Splines.
IEEE Trans. Image Process., 2007
Proceedings of the 2007 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2007
2006
Proceedings of the Biomedical Image Registration, Third International Workshop, 2006
Proceedings of the Medical Imaging 2006: Image Processing, 2006
2005
Nonrigid registration with adaptive content-based filtering of the deformation field.
Proceedings of the Medical Imaging 2005: Image Processing, 2005
Comparison of gradient approximation techniques for optimisation of mutual information in nonrigid registration.
Proceedings of the Medical Imaging 2005: Image Processing, 2005