An integrated structure- and system-based framework to identify new targets of metabolites and known drugs. - Hammad Naveed; Umar S. Hameed; Deborah Harrus; William Bourguet; Stefan T. Arold; Xin Gao 001 (Bioinform., 2015)

Proteome-level assessment of origin, prevalence and function of leucine-aspartic acid (LD) motifs. - Tanvir Alam; Meshari Alazmi; Rayan Naser; Franceline Huser; Afaque A. Momin; Veronica Astro; SeungBeom Hong; Katarzyna W. Walkiewicz; Christian G. Canlas; Raphaël Huser; Amal J. Ali; Jasmeen Merzaban; et al. (Bioinform., 2020)

Intrinsic negative feedback as a limiting factor for the evolution of higher forms of intelligence. - Stefan T. Arold (F1000Research, 2020)

Identifying Novel Drug Targets by iDTPnd: A Case Study of Kinase Inhibitors. - Hammad Naveed; Corinna Reglin; Thomas Schubert; Xin Gao 001; Stefan T. Arold; Michael L. Maitland (Genom. Proteom. Bioinform., 2021)

QAUST: Protein Function Prediction Using Structure Similarity, Protein Interaction, and Functional Motifs. - Fatima Zohra Smaili; Shuye Tian; Ambrish Roy; Meshari Alazmi; Stefan T. Arold; Srayanta Mukherjee; P. Scott Hefty; Wei Chen 029; Xin Gao 001 (Genom. Proteom. Bioinform., 2021)

Protein function prediction as approximate semantic entailment. - Maxat Kulmanov; Francisco J. Guzmán-Vega; Paula Duek Roggli; Lydie Lane; Stefan T. Arold; Robert Hoehndorf (Nat. Mac. Intell., 2024)