Phytome: a platform for plant comparative genomics. - Stefanie Hartmann; Dihui Lu; Jason Phillips; Todd J. Vision (Nucleic Acids Res., 2006)

GOblet: Annotation of anonymous sequence data with Gene Ontology and Pathway terms. - Detlef Groth; Stefanie Hartmann; Georgia Panopoulou; Albert J. Poustka; Steffen Hennig (J. Integr. Bioinform., 2008)

A hierarchical model for incomplete alignments in phylogenetic inference. - Fuxia Cheng; Stefanie Hartmann; Mayetri Gupta; Joseph G. Ibrahim; Todd J. Vision (Bioinform., 2009)

Data integration using scanners with SQL output - The Bioscanners project at sourceforge. - Detlef Groth; Stefanie Hartmann; Martin Friemel; Natascha Hill; Stefan Muller; Albert J. Poustka; Georgia Panopoulou (J. Integr. Bioinform., 2010)

Analysis of phylogenetic signal in protostomial intron patterns using Mutual Information. - Natascha Hill; Alexander Leow; Christoph Bleidorn; Detlef Groth; Ralph Tiedemann; Joachim Selbig; Stefanie Hartmann (Theory Biosci., 2013)