Cycling in ecological networks: Finn's index revisited . - Stefano Allesina; Robert E. Ulanowicz (Comput. Biol. Chem., 2004)

WAND: an ecological network analysis user-friendly tool. - Stefano Allesina; Cristina Bondavalli (Environ. Model. Softw., 2004)

Accelerating the pace of discovery by changing the peer review algorithm - Stefano Allesina (CoRR, 2009)

Googling Food Webs: Can an Eigenvector Measure Species' Importance for Coextinctions? - Stefano Allesina; Mercedes Pascual (PLoS Comput. Biol., 2009)

Frequency-Dependent Selection Predicts Patterns of Radiations and Biodiversity. - Carlos J. Melián; David Alonso; Diego P. Vázquez; James Regetz; Stefano Allesina (PLoS Comput. Biol., 2010)

Characterizing a scientific elite: the social characteristics of the most highly cited scientists in environmental science and ecology. - John N. Parker; Christopher J. Lortie; Stefano Allesina (Scientometrics, 2010)

Spatial Guilds in the Serengeti Food Web Revealed by a Bayesian Group Model. - Edward B. Baskerville; Andy P. Dobson; Trevor Bedford; Stefano Allesina; T. Michael Anderson; Mercedes Pascual (PLoS Comput. Biol., 2011)

Does Sex Speed Up Evolutionary Rate and Increase Biodiversity? - Carlos J. Melián; David Alonso; Stefano Allesina; Richard S. Condit; Rampal S. Etienne (PLoS Comput. Biol., 2012)

Characterizing a scientific elite (B): publication and citation patterns of the most highly cited scientists in environmental science and ecology. - John N. Parker; Stefano Allesina; Christopher J. Lortie (Scientometrics, 2013)

Metapopulation Persistence in Random Fragmented Landscapes. - Jacopo Grilli; György Barabás; Stefano Allesina (PLoS Comput. Biol., 2015)

What Can Interaction Webs Tell Us About Species Roles? - Elizabeth L. Sander; J. Timothy Wootton; Stefano Allesina (PLoS Comput. Biol., 2015)

Ten Simple (Empirical) Rules for Writing Science. - Cody J. Weinberger; James A. Evans; Stefano Allesina (PLoS Comput. Biol., 2015)

Telling ecological networks apart by their structure: A computational challenge. - Matthew J. Michalska-Smith; Stefano Allesina (PLoS Comput. Biol., 2019)