Estimation of false discovery proportion under general dependence. - Yudi Pawitan; Stefano Calza; Alexander Ploner (Bioinform., 2006)

Multidimensional local false discovery rate for microarray studies. - Alexander Ploner; Stefano Calza; Arief Gusnanto; Yudi Pawitan (Bioinform., 2006)

Detecting differential expression in microarray data: comparison of optimal procedures. - Elena Perelman; Alexander Ploner; Stefano Calza; Yudi Pawitan (BMC Bioinform., 2007)

Unequal group variances in microarray data analyses. - Meaza Demissie; Barbara Mascialino; Stefano Calza; Yudi Pawitan (Bioinform., 2008)

Normalization of oligonucleotide arrays based on the least-variant set of genes. - Stefano Calza; Davide Valentini; Yudi Pawitan (BMC Bioinform., 2008)

Identification of recurrent regions of copy-number variants across multiple individuals. - Teo Shu Mei; Agus Salim; Stefano Calza; Ku Chee Seng; Kee Seng Chia; Yudi Pawitan (BMC Bioinform., 2010)

Joint estimation of isoform expression and isoform-specific read distribution using multisample RNA-Seq data. - Chen Suo; Stefano Calza; Agus Salim; Yudi Pawitan (Bioinform., 2014)

Integration of somatic mutation, expression and functional data reveals potential driver genes predictive of breast cancer survival. - Chen Suo; Olga Hrydziuszko; Donghwan Lee 001; Setia Pramana; Dhany Saputra; Himanshu Joshi; Stefano Calza; Yudi Pawitan (Bioinform., 2015)

Cell-level somatic mutation detection from single-cell RNA sequencing. - Trung-Nghia Vu; Ha-Nam Nguyen; Stefano Calza; Krishna R. Kalari; Liewei Wang; Yudi Pawitan (Bioinform., 2019)

Dataset: Impact of β-Galactosylceramidase Overexpression on the Protein Profile of Braf(V600E) Mutated Melanoma Cells. - Davide Capoferri; Paola Chiodelli; Stefano Calza; Marcello Manfredi; Marco Presta (Data, 2023)