Multi-Sided Compression Performance Assessment of ABI SOLiD WES Data. - Tommaso Mazza; Stefano Castellana (Algorithms, 2013)

Congruency in the prediction of pathogenic missense mutations: state-of-the-art web-based tools. - Stefano Castellana; Tommaso Mazza (Briefings Bioinform., 2013)

A solid quality-control analysis of AB SOLiD short-read sequencing data. - Stefano Castellana; Marta Romani; Enza Maria Valente; Tommaso Mazza (Briefings Bioinform., 2013)

Affinity analysis of differentially expressed genes in hepatocytes expressing HCV core genotype 1b or 3a. - Tommaso Mazza; Stefano Castellana; Angelo Andriulli; Charles Auffray; Manlio Vinciguerra; Valerio Pazienza (Biosyst., 2013)

High-confidence assessment of functional impact of human mitochondrial non-synonymous genome variations by APOGEE. - Stefano Castellana; Caterina Fusilli; Gianluigi Mazzoccoli; Tommaso Biagini; Daniele Capocefalo; Massimo Carella; Angelo L. Vescovi; Tommaso Mazza (PLoS Comput. Biol., 2017)

Molecular dynamics recipes for genome research. - Tommaso Biagini; Giovanni Chillemi; Gianluigi Mazzoccoli; Alessandro Grottesi; Caterina Fusilli; Daniele Capocefalo; Stefano Castellana; Angelo L. Vescovi; Tommaso Mazza (Briefings Bioinform., 2018)

A comparative benchmark of classic DNA motif discovery tools on synthetic data. - Stefano Castellana; Tommaso Biagini; Luca Parca; Francesco Petrizzelli; Salvatore Daniele Bianco; Angelo Luigi Vescovi; Massimo Carella; Tommaso Mazza (Briefings Bioinform., 2021)

MitImpact 3: modeling the residue interaction network of the Respiratory Chain subunits. - Stefano Castellana; Tommaso Biagini; Francesco Petrizzelli; Luca Parca; Noemi Panzironi; Viviana Caputo; Angelo L. Vescovi; Massimo Carella; Tommaso Mazza (Nucleic Acids Res., 2021)

Connecting the dots: A practical evaluation of web-tools for describing protein dynamics as networks. - Francesco Petrizzelli; Tommaso Biagini; Salvatore Daniele Bianco; Niccolò Liorni; Alessandro Napoli 003; Stefano Castellana; Tommaso Mazza (Frontiers Bioinform., 2022)