Assessment of microstructural signal compartments across the corpus callosum using multi-echo gradient recalled echo at 7 T. - Kiran Thapaliya; Viktor Vegh; Steffen Bollmann; Markus Barth (NeuroImage, 2018)

DeepQSM - using deep learning to solve the dipole inversion for quantitative susceptibility mapping. - Steffen Bollmann; Kasper Gade Bøtker Rasmussen; Mads Kristensen; Rasmus Guldhammer Blendal; Lasse Riis Østergaard; Maciej Plocharski; Kieran O'Brien; Christian Langkammer; Andrew L. Janke; Markus Barth (NeuroImage, 2019)

Non-linear realignment improves hippocampus subfield segmentation reliability. - Thomas B. Shaw; Steffen Bollmann; Nicole T. Atcheson; Lachlan T. Strike; Christine Cong Guo; Katie L. McMahon; Jurgen Fripp; Margaret J. Wright; Olivier Salvado; Markus Barth (NeuroImage, 2019)

DeepRetinotopy: Predicting the Functional Organization of Human Visual Cortex from Structural MRI Data using Geometric Deep Learning. - Fernanda L. Ribeiro; Steffen Bollmann; Alexander M. Puckett (CoRR, 2020)

Longitudinal Automatic Segmentation of Hippocampal Subfields (LASHiS) using multi-contrast MRI. - Thomas B. Shaw; Ashley York; Maryam Ziaei; Markus Barth; Steffen Bollmann (NeuroImage, 2020)

Predicting the retinotopic organization of human visual cortex from anatomy using geometric deep learning. - Fernanda L. Ribeiro; Steffen Bollmann; Alexander M. Puckett (NeuroImage, 2021)

An explainability framework for cortical surface-based deep learning. - Fernanda L. Ribeiro; Steffen Bollmann; Ross Cunnington; Alexander M. Puckett (CoRR, 2022)

Open-Source Hypothalamic-ForniX (OSHy-X) Atlases and Segmentation Tool for 3T and 7T. - Jeryn Chang; Frederik Steyn; Shyuan Ngo; Robert Henderson; Christine Cong Guo; Steffen Bollmann; Jurgen Fripp; Markus Barth; Thomas B. Shaw (J. Open Source Softw., 2022)

NeXtQSM - A complete deep learning pipeline for data-consistent Quantitative Susceptibility Mapping trained with hybrid data. - Francesco Cognolato; Kieran O'Brien; Jin Jin 003; Simon Robinson 002; Frederik B. Laun; Markus Barth; Steffen Bollmann (Medical Image Anal., 2023)

Super-resolution QSM in little or no additional time for imaging (NATIve) using 2D EPI imaging in 3 orthogonal planes. - Beáta Bachratá; Steffen Bollmann; Jin Jin 003; Monique Tourell; Assunta Dal-Bianco; Siegfried Trattnig; Markus Barth; Stefan Ropele; Christian Enzinger; Simon Robinson 002 (NeuroImage, 2023)

Modality-Specific Strategies for Medical Image Segmentation Using Lightweight SAM Architectures. - Thuy Thanh Dao; Xincheng Ye; Joshua D. Scarsbrook; Balarupan Gowrienanthan; Fernanda L. Ribeiro; Steffen Bollmann (MedSAM@CVPR, 2024)

Segmentation of the human tongue musculature using MRI: Field guide and validation in motor neuron disease. - Thomas B. Shaw; Fernanda L. Ribeiro; Xiangyun Zhu; Patrick Aiken; Saskia Bollmann; Steffen Bollmann; Jeryn Chang; Kali Chidley; Harriet Dempsey-Jones; Zeinab Eftekhari; Jennifer Gillespie; Robert Henderson; et al. (Comput. Biol. Medicine, 2025)