MEMOIR: Software Agents for Finding Similar Users by Trails. - Aggelos Pikrakis; Tilemahos Bitsikas; Stelios Sfakianakis; Michael Hatzopoulos; David DeRoure; Wendy Hall 001; Siegfried Reich; Gary Hill; Mark A. Stairmand (PAAM, 1998)

GridR: An R-Based Grid-Enabled Tool for Data Analysis in ACGT Clinico-Genomics Trials. - Dennis Wegener; Thierry Sengstag; Stelios Sfakianakis; Stefan Rüping 001; Anthony Assi (eScience, 2007)

Extending Workflow Management for Knowledge Discovery in Clinico-Genomic Data. - Stefan Rüping 001; Stelios Sfakianakis; Manolis Tsiknakis (HealthGrid, 2007)

Knowledge Discovery Scientific Workflows in Clinico-Genomics. - George Potamias; Lefteris Koumakis; Alexandros Kanterakis; Stelios Sfakianakis; Anastasia Analyti; Vassilis Moustakis; Dimitris Kafetzopoulos; Stefan Rüping 001; Manolis Tsiknakis (ICTAI (1), 2007)

Delivering a Lifelong Integrated Electronic Health Record Based on a Service Oriented Architecture. - Dimitrios G. Katehakis; Stelios Sfakianakis; G. Kavlentakis; Dimitris N. Anthoulakis; Manolis Tsiknakis (IEEE Trans. Inf. Technol. Biomed., 2007)

A Semantic Grid Services Architecture in Support of Efficient Knowledge Discovery from Multilevel Clinical and Genomic Datasets. - Manolis Tsiknakis; Stelios Sfakianakis; Stefan Rüping 001; Oswaldo Trelles; Thierry Siestang; Brecht Claerhout; Vassilis Virvilis (HEALTHINF (1), 2008)

Supporting Parallel R Code in Clinical Trials: A Grid-Based Approach. - Dennis Wegener; Thierry Sengstag; Stelios Sfakianakis; Stefan Rüping 001 (ISPA, 2008)

A Semantic Grid Infrastructure Enabling Integrated Access and Analysis of Multilevel Biomedical Data in Support of Postgenomic Clinical Trials on Cancer. - Manolis Tsiknakis; Mathias Brochhausen; Jarek Nabrzyski; Juliusz Pukacki; Stelios Sfakianakis; George Potamias; Christine Desmedt; Dimitris Kafetzopoulos (IEEE Trans. Inf. Technol. Biomed., 2008)

Web-Based Authoring and Secure Enactment of Bioinformatics Workflows. - Stelios Sfakianakis; Lefteris Koumakis; George Zacharioudakis; Manolis Tsiknakis (GPC Workshops, 2009)

Workflows for Intelligent Monitoring using Proxy Services. - Stefan Rüping 001; Dennis Wegener; Stelios Sfakianakis; Thierry Sengstag (HealthGrid, 2009)

Discovery of Genotype-to-Phenotype Associations: A Grid-enabled Scientific Workflow Setting. - Lefteris Koumakis; Stelios Sfakianakis; Vassilis Moustakis; George Potamias (AIAI (Workshops), 2009)

Building a System for Advancing Clinico-Genomic Trials on Cancer. - Stelios Sfakianakis; Norbert M. Graf; Alexander Hoppe; Stefan Rüping 001; Dennis Wegener; Lefteris Koumakis; George Zacharioudakis (AIAI (Workshops), 2009)

A Semantic Infrastructure for the Integration of Bioinformatics Services. - George Zacharioudakis; Lefteris Koumakis; Stelios Sfakianakis; Manolis Tsiknakis (ISDA, 2009)

GridR: An R-based tool for scientific data analysis in grid environments. - Dennis Wegener; Thierry Sengstag; Stelios Sfakianakis; Stefan Rüping 001; Anthony Assi (Future Gener. Comput. Syst., 2009)

Scientific discovery workflows in bioinformatics: A scenario for the coupling of molecular regulatory pathways and gene-expression profiles. - Alexandros Kanterakis; Giorgos otamias; Giorgos Zacharioudakis; Lefteris Koumakis; Stelios Sfakianakis; Manolis Tsiknakis (MedInfo, 2010)

A disease annotation study of gene signatures in a breast cancer microarray dataset. - Foivos Gypas; Ekaterini S. Bei; Michalis E. Zervakis; Stelios Sfakianakis (EMBC, 2011)

ACGT: Advancing Clinico-genomic trials on cancer - Four years of experience. - Luis Martín; Alberto Anguita; Norbert M. Graf; Manolis Tsiknakis; Mathias Brochhausen; Stefan Rüping 001; Anca I. D. Bucur; Stelios Sfakianakis; Thierry Sengstag; Francesca Buffa; Holger Stenzhorn (MIE, 2011)

The ACGT Master Ontology and its applications - Towards an ontology-driven cancer research and management system. - Mathias Brochhausen; Andrew D. Spear; Cristian Cocos; Gabriele Weiler; Luis Martín; Alberto Anguita; Holger Stenzhorn; Evangelia Daskalaki; Fatima Schera; Ulf Schwarz; Stelios Sfakianakis; Stephan Kiefer; et al. (J. Biomed. Informatics, 2011)

The ACGT project in retrospect: Lessons learned and future outlook. - Anca I. D. Bucur; Stefan Rüping 001; Thierry Sengstag; Stelios Sfakianakis; Manolis Tsiknakis; Dennis Wegener (ICCS, 2011)

A technical infrastructure to support personalized medicine. - Manolis Tsiknakis; Stelios Sfakianakis; Kostas Marias; Norbert M. Graf (BIBE, 2012)

An architecture for integrating cancer model repositories. - Stelios Sfakianakis; Vangelis Sakkalis; Kostas Marias; Georgios S. Stamatakos; Steve McKeever; Thomas S. Deisboeck; Norbert M. Graf (EMBC, 2012)

Scientific workflows to support in silico modeling in cancer research. - Stelios Sfakianakis; Vangelis Sakkalis; Kostas Marias (IARWISOI, 2012)

Bridging Social Media Technologies and Scientific Research: A Twitter-Enabled Platform for VPH Modeling. - Vangelis Sakkalis; Stelios Sfakianakis; Kostas Marias (MobiHealth, 2012)

A generic framework for the elicitation of stable and reliable gene expression signatures. - Nikolaos-Kosmas Chlis; Stelios Sfakianakis; Ekaterini S. Bei; Michalis E. Zervakis (BIBE, 2013)

p-medicine: A Medical Informatics Platform for Integrated Large Scale Heterogeneous Patient Data. - J. Marés; Lev Shamardin; Gabriele Weiler; Alberto Anguita; Stelios Sfakianakis; Elias Neri; Stefan J. Zasada; Norbert M. Graf; Peter V. Coveney (AMIA, 2014)

miRNA Based Pathway Analysis Tool in Nephroblastoma as a Proof of Principle for other Cancer Domains. - Lefteris Koumakis; George Potamias; Stelios Sfakianakis; Vassilis Moustakis; Michalis E. Zervakis; Norbert M. Graf; Manolis Tsiknakis (BIBE, 2014)

Natural Language Processing for Biomedical Tools Discovery: A Feasibility Study and Preliminary Results. - Pepi Sfakianaki; Lefteris Koumakis; Stelios Sfakianakis; Manolis Tsiknakis (BIS, 2014)

Web-Based Workflow Planning Platform Supporting the Design and Execution of Complex Multiscale Cancer Models. - Vangelis Sakkalis; Stelios Sfakianakis; Eleftheria Tzamali; Kostas Marias; Georgios S. Stamatakos; Fay Misichroni; Eleftherios Ouzounoglou; Eleni A. Kolokotroni; Dimitra D. Dionysiou; David Johnson 006; Steve McKeever; Norbert M. Graf (IEEE J. Biomed. Health Informatics, 2014)

On the Identification of Circulating Tumor Cells in Breast Cancer. - Stelios Sfakianakis; Ekaterini S. Bei; Michalis E. Zervakis; Despoina Vassou; Dimitris Kafetzopoulos (IEEE J. Biomed. Health Informatics, 2014)

The Technologically Integrated Oncosimulator: Combining Multiscale Cancer Modeling With Information Technology in the In Silico Oncology Context. - Georgios S. Stamatakos; Dimitra D. Dionysiou; Aran Lunzer; Robert G. Belleman; Eleni A. Kolokotroni; Eleni Ch. Georgiadi; Marius Erdt; Juliusz Pukacki; Stefan Rüping 001; Stavroula G. Giatili; Alberto d'Onofrio; Stelios Sfakianakis; et al. (IEEE J. Biomed. Health Informatics, 2014)

Digital patient: Personalized and translational data management through the MyHealthAvatar EU project. - Haridimos Kondylakis; Emmanouil G. Spanakis; Stelios Sfakianakis; Vangelis Sakkalis; Manolis Tsiknakis; Kostas Marias; Xia Zhao 001; HongQing Yu; Feng Dong 005 (EMBC, 2015)

A network-based approach to enrich gene signatures for the prediction of breast cancer metastases. - Stelios Sfakianakis; Ekaterini S. Bei; Michalis E. Zervakis; Dimitris Kafetzopoulos (EMBC, 2015)

Semantic biomedical resource discovery: a Natural Language Processing framework. - Pepi Sfakianaki; Lefteris Koumakis; Stelios Sfakianakis; Galateia Iatraki; George Zacharioudakis; Norbert M. Graf; Kostas Marias; Manolis Tsiknakis (BMC Medical Informatics Decis. Mak., 2015)

Bridging miRNAs and pathway analysis in clinical decision support: a case study in nephroblastoma. - Lefteris Koumakis; Kamana Sigdel; George Potamias; Stelios Sfakianakis; Jasper van Leeuwen; George Zacharioudakis; Vassilis Moustakis; Michalis E. Zervakis; Anca I. D. Bucur; Kostas Marias; Norbert M. Graf; Manolis Tsiknakis (Netw. Model. Anal. Health Informatics Bioinform., 2015)

Biclustering strategies for genetic marker selection in gynecologic tumor cell lines. - Androniki Alevyzaki; Stelios Sfakianakis; Ekaterini S. Bei; Eva Obermayr; Robert Zeillinger; Dimitrios I. Fotiadis; Michalis E. Zervakis (EMBC, 2016)

Addressing drug-drug and drug-food interactions through personalized empowerment services for healthcare. - Marios Spanakis; Emmanouil G. Spanakis; Haridimos Kondylakis; Stelios Sfakianakis; Irini Genitsaridi; Vangelis Sakkalis; Manolis Tsiknakis; Kostas Marias (EMBC, 2016)

Exploration of disease-specific biomarkers in cancer research by integrating biological knowledge and high throughput data - Stelios Sfakianakis (2016)

Quantitative comparison of motion history image variants for video-based depression assessment. - Anastasia Pampouchidou; Matthew Pediaditis; Anna Maridaki; Muhammad Awais 003; Calliope-Marina Vazakopoulou; Stelios Sfakianakis; Manolis Tsiknakis; Panagiotis G. Simos; Kostas Marias; Fan Yang 019; Fabrice Mériaudeau (EURASIP J. Image Video Process., 2017)

PDCA: An eHealth service for the management of drug interactions with complementary and alternative medicines. - Marios Spanakis; Stelios Sfakianakis; Emmanouil G. Spanakis; George Kallergis; Vangelis Sakkalis (BHI, 2018)

VPH-HF: A software framework for the execution of complex subject-specific physiology modelling workflows. - Marco Viceconti; Simone Bnà; Daniele Tartarini; Stelios Sfakianakis; James A. Grogan; Dawn C. Walker; Samuel Gamble; Debora Testi (J. Comput. Sci., 2018)

Drugs with SMILES Similar to Coxibs. - George Kallergis; Stelios Sfakianakis; Michael E. Zervakis; Marios Spanakis (BIBE, 2019)

Towards an unobtrusive baby monitoring system for real-time detection of possibly hazardous situations*. - Vangelis Sakkalis; Matthew Pediaditis; Stelios Sfakianakis (IST, 2019)

PharmActa: Personalized pharmaceutical care eHealth platform for patients and pharmacists. - Marios Spanakis; Stelios Sfakianakis; George Kallergis; Emmanouil G. Spanakis; Vangelis Sakkalis (J. Biomed. Informatics, 2019)

Cyber-attacks and threats for healthcare - a multi-layer thread analysis. - Emmanouil G. Spanakis; Silvia Bonomi; Stelios Sfakianakis; Giuseppe Santucci; Simone Lenti; Mara Sorella; Florin Dragos Tanasache; Alessia Palleschi; Claudio Ciccotelli; Vangelis Sakkalis; Sabina Magalini (EMBC, 2020)

Automated facial video-based recognition of depression and anxiety symptom severity: cross-corpus validation. - Anastasia Pampouchidou; Matthew Pediaditis; Eleni Kazantzaki; Stelios Sfakianakis; I. A. Apostolaki; K. Argyraki; Dimitris Manousos; Fabrice Mériaudeau; Kostas Marias; F. Yang; Manolis Tsiknakis; Maria Basta; et al. (Mach. Vis. Appl., 2020)

PANACEA resilient and secure toolkit for healthcare infrastructures. - Stelios Sfakianakis; Emmanouil G. Spanakis; Pasquale Mari; Ivan Tesfai Ogbu; Martina Bossini Baroggi; Sabina Magalini; Vangelis Sakkalis (EMBC, 2021)

Emerging and Established Trends to Support Secure Health Information Exchange. - Emmanouil G. Spanakis; Stelios Sfakianakis; Silvia Bonomi; Claudio Ciccotelli; Sabina Magalini; Vangelis Sakkalis (Frontiers Digit. Health, 2021)

Data Ingestion for AI in Prostate Cancer. - Haridimos Kondylakis; Stelios Sfakianakis; Varvara Kalokyri; Nikolaos S. Tachos; Dimitrios I. Fotiadis; Kostas Marias; Manolis Tsiknakis (MIE, 2022)

CARDIOCARE platform: A beyond the state of the art approach for the management of elderly multimorbid patients with breast cancer therapy induced cardiac toxicity*. - Kostas M. Tsiouris; Grigorios Kalliatakis; Ketti Mazzocco; Bostjan Seruga; Kostas Marias; Georgia S. Karanasiou; Athos Antoniades; Andri Papakonstantinou; Constanza Conti; Manolis Tsiknakis; Stelios Sfakianakis; Lampros Lakkas; et al. (BIBM, 2023)

CARDIOCARE: An integrated platform for the management of elderly multimorbid patients with breast cancer therapy induced cardiac toxicity. - Georgia S. Karanasiou; Lefteris Koumakis; Stelios Sfakianakis; Georgios C. Manikis; Gregory Kalliatakis; Athos Antoniades; Lampros Lakkas; Davide Mauri; C. Cipolla; Ketti Mazzocco; Andri Papakonstantinou; Gerasimos Filippatos; et al. (EMBC, 2023)

AI Model Passport: Data and System Traceability Framework for Transparent AI in Health. - Varvara Kalokyri; Nikolaos S. Tachos; Charalampos Kalantzopoulos; Stelios Sfakianakis; Haridimos Kondylakis; Dimitrios I. Zaridis; Sara Colantonio; Daniele Regge; Nikolaos Papanikolaou 003; ProCAncer-I Consortium; Konstantinos Marias; Dimitrios I. Fotiadis; et al. (CoRR, 2025)