MISUR: Motif Identification and Structure Refinement Tool. - Stephan Kopp; Klaus Lindauer; Christian Forst (German Conference on Bioinformatics, 1996)

Neutral networks: a combinatorial perspective. - Stephan Kopp; Christian M. Reidys (Adv. Complex Syst., 1999)

Sequential Dynamical Systems and Applications to Simulations. - Christopher L. Barrett; B. W. Bush; Stephan Kopp; Henning S. Mortveit; Christian M. Reidys (Annual Simulation Symposium, 2000)

RNA Shape Space Topology. - Jan Cupal; Stephan Kopp; Peter F. Stadler (Artif. Life, 2000)

Similarity based SAR (SIBAR) as tool for early ADME profiling. - Christian Th. Klein; Dominik Kaiser; Stephan Kopp; Peter Chiba; Gerhard F. Ecker (J. Comput. Aided Mol. Des., 2002)