A Derivation of Entropy and the Maximum Entropy Criterion in the Context of Decision Problems. - Stephen A. Smith (IEEE Trans. Syst. Man Cybern., 1974)

Minimizing Processing Costs in an Automated Office System. - Stephen A. Smith (IEEE Trans. Syst. Man Cybern., 1980)

Projecting Demand for Electronic Communications in Automated Offices. - Stephen A. Smith; Robert I. Benjamin (ACM Trans. Inf. Syst., 1983)

Technical Note - There are No Undiscovered Priority Index Sequencing Rules for Minimizing Total Delay Costs. - Michael H. Rothkopf; Stephen A. Smith (Oper. Res., 1984)

Simultaneous Bidding with a Fixed Charge if Any Bid is Successful. - Stephen A. Smith; Michael H. Rothkopf (Oper. Res., 1985)

Modeling the Performance of Organizational Structures. - Thomas W. Malone; Stephen A. Smith (Oper. Res., 1988)

Design and Management of Curtailable Electricity Service to Reduce Annual Peaks. - Shmuel S. Oren; Stephen A. Smith (Oper. Res., 1992)

Management of Multi-Item Retail Inventory Systems with Demand Substitution. - Stephen A. Smith; Narendra Agrawal (Oper. Res., 2000)

Phyutility: a phyloinformatics tool for trees, alignments and molecular data. - Stephen A. Smith; Casey W. Dunn (Bioinform., 2008)

Algorithms, data structures, and numerics for likelihood-based phylogenetic inference of huge trees. - Fernando Izquierdo-Carrasco; Stephen A. Smith; Alexandros Stamatakis (BMC Bioinform., 2011)

treePL: divergence time estimation using penalized likelihood for large phylogenies. - Stephen A. Smith; Brian C. O'Meara (Bioinform., 2012)

RAxML-Light: a tool for computing terabyte phylogenies. - Alexandros Stamatakis; Andre J. Aberer; Christian Goll; Stephen A. Smith; Simon A. Berger; Fernando Izquierdo-Carrasco (Bioinform., 2012)

Optimal inventory management for a retail chain with diverse store demands. - Narendra Agrawal; Stephen A. Smith (Eur. J. Oper. Res., 2013)

Analyzing and Synthesizing Phylogenies Using Tree Alignment Graphs. - Stephen A. Smith; Joseph W. Brown; Cody E. Hinchliff (PLoS Comput. Biol., 2013)

PUmPER: phylogenies updated perpetually. - Fernando Izquierdo-Carrasco; John Cazes; Stephen A. Smith; Alexandros Stamatakis (Bioinform., 2014)

Phylesystem: a git-based data store for community-curated phylogenetic estimates. - Emily Jane McTavish; Cody E. Hinchliff; James F. Allman; Joseph W. Brown; Karen Cranston; Mark T. Holder; Jonathan Rees; Stephen A. Smith (Bioinform., 2015)

Heterogeneous molecular processes among the causes of how sequence similarity scores can fail to recapitulate phylogeny. - Stephen A. Smith; James Pease (Briefings Bioinform., 2017)

Phyx: phylogenetic tools for unix. - Joseph W. Brown; Joseph F. Walker; Stephen A. Smith (Bioinform., 2017)

Optimal Markdown Pricing and Inventory Allocation for Retail Chains with Inventory Dependent Demand. - Stephen A. Smith; Narendra Agrawal (Manuf. Serv. Oper. Manag., 2017)

Optimal inventory management using retail prepacks. - Narendra Agrawal; Stephen A. Smith (Eur. J. Oper. Res., 2019)

A Markov Decision Model for Managing Display-Advertising Campaigns. - Narendra Agrawal; Sami Najafi-Asadolahi; Stephen A. Smith (Manuf. Serv. Oper. Manag., 2023)

Dynamic Pricing and Bidding for Display Advertising Campaigns. - Narendra Agrawal; Sami Najafi-Asadolahi; Stephen A. Smith (Manuf. Serv. Oper. Manag., 2025)