Symbionticism and Complex Adaptive Systems I: Implications of Having Symbiosis Occur in Nature. - Jason M. Daida; Catherine S. Grasso; Stephen A. Stanhope; Steven J. Ross (Evolutionary Programming, 1996)

An Individually Variable Mutation-Rate Strategy for Genetic Algorithms. - Stephen A. Stanhope; Jason M. Daida (Evolutionary Programming, 1997)

Optimal Mutation and Crossover Rates for a Genetic Algorithm Operating in a Dynamic Environment. - Stephen A. Stanhope; Jason M. Daida (Evolutionary Programming, 1998)

Genetic Programming for Automatic Target Classification and Recognition. - Stephen A. Stanhope; Jason M. Daida (Evolutionary Programming, 1998)

(1+1) genetic algorithm fitness dynamics in a changing environment. - Stephen A. Stanhope; Jason M. Daida (CEC, 1999)

What Makes a Problem GP-Hard? Analysis of a Tunably Difficult Problem in Genetic Programming. - Jason M. Daida; Robert R. Bertram; Stephen A. Stanhope; Jonathan C. Khoo; Shahbaz A. Chaudhary; Omer A. Chaudhri; John Polito (Genet. Program. Evolvable Mach., 2001)

Evolution strategies for multivariate-to-anything partially specified random vector generation. - Stephen A. Stanhope (IEEE Congress on Evolutionary Computation, 2004)

Statistical Use of Argonaute Expression and RISC Assembly in microRNA Target Identification. - Stephen A. Stanhope; Srikumar Sengupta; Johan den Boon; Paul Ahlquist; Michael A. Newton (PLoS Comput. Biol., 2009)

Review of Pólya Urn models by Hosam Mahmoud. - Stephen A. Stanhope (SIGACT News, 2011)

GLOGS: a fast and powerful method for GWAS of binary traits with risk covariates in related populations. - Stephen A. Stanhope; Mark Abney (Bioinform., 2012)

Enhancing patient representation learning with inferred family pedigrees improves disease risk prediction. - Xiayuan Huang; Jatin Arora 010; Abdullah Mesut Erzurumluoglu; Stephen A. Stanhope; Daniel Lam; Pierre Khoueiry; Jan N. Jensen; James Cai; Nathan Lawless; Jan Kriegl; Zhihao Ding; Johann de Jong; et al. (J. Am. Medical Informatics Assoc., 2025)