AMOD: a morpholino oligonucleotide selection tool. - Eric W. Klee; Kyong Jin Shim; Michael A. Pickart; Stephen C. Ekker; Lynda B. M. Ellis (Nucleic Acids Res., 2005)

A PATO-compliant zebrafish screening database (MODB): management of morpholino knockdown screen information. - Michelle N. Knowlton; Tongbin Li; Yongliang Ren; Brent R. Bill; Lynda B. M. Ellis; Stephen C. Ekker (BMC Bioinform., 2008)

zfishbook: connecting you to a world of zebrafish revertible mutants. - Karl J. Clark; David P. Argue; Andrew M. Petzold; Stephen C. Ekker (Nucleic Acids Res., 2012)

Mojo hand, a TALEN design tool for genome editing applications. - Kevin L. Neff; David P. Argue; Alvin C. Ma; Han B. Lee; Karl J. Clark; Stephen C. Ekker (BMC Bioinform., 2013)

The Zebrafish GenomeWiki: a crowdsourcing approach to connect the long tail for zebrafish gene annotation. - Meghna Singh; Deeksha Bhartiya; Jayant Maini; Meenakshi Sharma; Angom Ramcharan Singh; Subburaj Kadarkaraisamy; Rajiv Rana; Ankit Sabharwal; Srishti Nanda; Aravindhakshan Ramachandran; Ashish Mittal; Shruti Kapoor; et al. (Database J. Biol. Databases Curation, 2014)

The Gene Sculpt Suite: a set of tools for genome editing. - Carla M. Mann; Gabriel Martínez-Gálvez; Jordan M. Welker; Wesley A. Wierson; Hirotaka Ata; Maira P. Almeida; Karl J. Clark; Jeffrey J. Essner; Maura McGrail; Stephen C. Ekker; Drena Dobbs (Nucleic Acids Res., 2019)