FunctSNP: an R package to link SNPs to functional knowledge and dbAutoMaker: a suite of Perl scripts to build SNP databases. - Stephen J. Goodswen; Cedric Gondro; Nathan S. Watson-Haigh; Haja N. Kadarmideen (BMC Bioinform., 2010)

A guide to in silico vaccine discovery for eukaryotic pathogens. - Stephen J. Goodswen; Paul J. Kennedy; John T. Ellis (Briefings Bioinform., 2013)

A novel strategy for classifying the output from an in silico vaccine discovery pipeline for eukaryotic pathogens using machine learning algorithms. - Stephen J. Goodswen; Paul J. Kennedy; John T. Ellis (BMC Bioinform., 2013)

Vacceed: a high-throughput in silico vaccine candidate discovery pipeline for eukaryotic pathogens based on reverse vaccinology. - Stephen J. Goodswen; Paul J. Kennedy; John T. Ellis (Bioinform., 2014)