A probabilistic graphical model for system-wide analysis of gene regulatory networks. - Stephen Kotiang; Ali Eslami (Bioinform., 2020)

Boolean factor graph model for biological systems: the yeast cell-cycle network. - Stephen Kotiang; Ali Eslami (BMC Bioinform., 2021)

Density Evolution for Noise Propagation Analysis in Biological Networks. - Stephen Kotiang; Ali Eslami (IEEE Access, 2022)

Boolean Factor Graph Modeling and Analysis of Gene Graphs: Budding Yeast Cell-Cycle. - Stephen Kotiang; Ali Eslami (CISS, 2023)