The AIS-5000 Parallel Processor. - Lorenz A. Schmitt; Stephen S. Wilson (IEEE Trans. Pattern Anal. Mach. Intell., 1988)

Neural Computing on a One Dimensional SIMD Array. - Stephen S. Wilson (IJCAI, 1989)

Teaching network connectivity using simulated annealing on a massively parallel processor. - Stephen S. Wilson (Proc. IEEE, 1991)

Theory of Matrix Morphology. - Stephen S. Wilson (IEEE Trans. Pattern Anal. Mach. Intell., 1992)

The Immune Epitope Database and Analysis Resource. - Alessandro Sette; Huynh-Hoa Bui; John Sidney; Philip E. Bourne; Søren Buus; Ward Fleri; R. Kubo; Ole Lund; D. Nemazee; Julia V. Ponomarenko; Muthu Sathiamurthy; Scott Stewart; et al. (PRIB, 2006)

Curation of complex, context-dependent immunological data. - Randi Vita; Kerrie Vaughan; Laura Zarebski; Nima Salimi; Ward Fleri; Howard Grey; Muthu Sathiamurthy; John Mokili; Huynh-Hoa Bui; Philip E. Bourne; Julia V. Ponomarenko; Romulo de Castro Jr.; et al. (BMC Bioinform., 2006)

A Community Resource Benchmarking Predictions of Peptide Binding to MHC-I Molecules. - Bjoern Peters; Huynh-Hoa Bui; Sune Frankild; Morten Nielsen 001; Claus Lundegaard; Emrah Kostem; Derek Basch; Kasper Lamberth; Mikkel Harndahl; Ward Fleri; Stephen S. Wilson; John Sidney; et al. (PLoS Comput. Biol., 2006)