Extending knowledge-based systems through closely-coupled graphics and windows. - Stephen T. C. Wong; John L. Wilson (IEA/AIE (2), 1989)

Object Formation in A Hybrid Knowledge Representation. - Stephen T. C. Wong; John L. Wilson (SEKE, 1989)

A Computational Model for Trial Reasoning. - Katsumi Nitta; Stephen T. C. Wong; Yoshihisa Ohtake (ICAIL, 1993)

A Product Assembly and Restoration Planning System for Ecologically Conscious Factories. - Stephen T. C. Wong; J. C. Fu; Carol A. Troy (DIISM, 1993)

A Multi-Level Description Scheme of Protein Conformation. - Kentaro Onizuka; Stephen T. C. Wong; Masato Ishikawa; Kiyoshi Asai (ISMB, 1993)

Design Guidelines for Object-Oriented Deductive Systems. - Stephen T. C. Wong; John L. Wilson (IEEE Trans. Knowl. Data Eng., 1993)

COSMO: a communication scheme for cooperative knowledge-based systems. - Stephen T. C. Wong (IEEE Trans. Syst. Man Cybern., 1993)

Preference-Based Decision Making for Cooperative Knowledge-Based Systems. - Stephen T. C. Wong (ACM Trans. Inf. Syst., 1994)

An Open System Knowledge Framework and its Bridge Evaluation Application. - Stephen T. C. Wong (IEEE Trans. Syst. Man Cybern. Syst., 1994)

Multimodal image fusion for noninvasive epilepsy surgery planning. - Stephen T. C. Wong; Robert C. Knowlton; Randy A. Hawkins; Kenneth D. Laxer (IEEE Computer Graphics and Applications, 1996)

Research Paper: A Cryptologic Based Trust Center for Medical Images. - Stephen T. C. Wong (J. Am. Medical Informatics Assoc., 1996)

A Deductive Object-Oriented Database System for Situated Inference in Law. - Stephen T. C. Wong; Satoshi Tojo (IEEE Trans. Knowl. Data Eng., 1996)

A hospital integrated framework for multimodality image base management. - Stephen T. C. Wong; H. K. Huang (IEEE Trans. Syst. Man Cybern. Part A, 1996)

Medical workstation design: enhancing graphical interface with 3D anatomical atlas. - Kent Soo Hoo; Stephen T. C. Wong; Ellen Grant (Image Processing, 1997)

Design of a multimedia system for multispecialty medical conferences. - Mehran Moshfeghi; Tony M. Chou; Hein P. A. Haas; H. K. Huang; William P. Lord; Joachim D. Schmidt; Jun Wang 006; Thomas Wendler 003; Stephen T. C. Wong; Yuan-Pin Yu; Christian Zellner (Image Processing, 1997)

Networked Multimedia for Medical Imaging. - Stephen T. C. Wong; H. K. Huang (IEEE Multim., 1997)

Editorial. - Stephen T. C. Wong (Int. J. Digit. Libr., 1997)

Issues and Applications of Digital Library Technology in Biomedical Imaging. - Stephen T. C. Wong; Kent Soo Hoo; Robert C. Knowlton; Randall A. Hawkins; Kenneth D. Laxer; Donny Tjandra (Int. J. Digit. Libr., 1997)

Coping with conflict in cooperative knowledge-based systems. - Stephen T. C. Wong (IEEE Trans. Syst. Man Cybern. Part A, 1997)

Security for the digital information age of medicine: Issues, applications, and implementation. - Michael A. Epstein; Michael S. Pasieka; William P. Lord; Stephen T. C. Wong; Nicholas J. Mankovich (J. Digit. Imaging, 1998)

Digital Teaching Files in Diagnostic Imaging. - Stephen T. C. Wong; Kent Soo Hoo (IEEE Computer Graphics and Applications, 1999)

A digital library for biomedical imaging on the Internet. - Stephen T. C. Wong; Donny Tjandra (IEEE Commun. Mag., 1999)

Human Brain Program Research Progress in Bioinformatics/ Neuroinformatics. - Stephen T. C. Wong; Stephen H. Koslow (J. Am. Medical Informatics Assoc., 2001)

Human Brain Program Research Progress in Biomedical Imaging/ Neuroscience, 2001. - Stephen T. C. Wong; Steven H. Koslow (J. Am. Medical Informatics Assoc., 2001)

Storage, data management, and retrieval in bioinformatics. - Stephen T. C. Wong; Anil Patwardhan (Storage and Retrieval for Media Databases, 2002)

Application of Information Technology: Design and Applications of a Multimodality Image Data Warehouse Framework. - Stephen T. C. Wong; Kent Soo Hoo; Robert C. Knowlton; Kenneth D. Laxer; Xinhua Cao; Randall A. Hawkins; William Dillon; Ronald L. Arenson (J. Am. Medical Informatics Assoc., 2002)

Quantitative effectiveness analysis of radiation therapy in temporal lobe epilepsy using diffusion tensor imaging techniques. - Xinhua Cao; Stephen T. C. Wong; Geoffrey S. Young; Songling Liu; William Dillon; Lynn Verhey; Nicholas Barbaro (CARS, 2003)

Integrating Bioinformatics Advances into Disease Management Systems to Improve Quality of Care. - Stephen T. C. Wong (CSB, 2003)

An XML message broker framework for exchange and integration of microarray data. - Donny Tjandra; Stephen T. C. Wong; Weimin Shen; Brian Pulliam; Elaine Yu; Laura Esserman (Bioinform., 2003)

Towards effective and rewarding data sharing. - Daniel Gardner; Arthur W. Toga; Giorgio A. Ascoli; Jackson T. Beatty; James F. Brinkley; Anders M. Dale; Peter T. Fox; Esther P. Gardner; John S. George; Nigel H. Goddard; Kristen M. Harris; Edward Herskovits; et al. (Neuroinformatics, 2003)

Workflow-enabled distributed component-based information architecture for digital medical imaging enterprises. - Stephen T. C. Wong; Donny Tjandra; Huili Wang; Weimin Shen (IEEE Trans. Inf. Technol. Biomed., 2003)

High Content Cellular Analysis and Their Applications. - Stephen T. C. Wong (CSB, 2004)

Cancer classification and prediction using logistic regression with Bayesian gene selection. - Xiaobo Zhou 001; Kuang-Yu Liu; Stephen T. C. Wong (J. Biomed. Informatics, 2004)

A web-based federated neuroinformatics model for surgical planning and clinical research applications in epilepsy. - Xinhua Cao; Stephen T. C. Wong; Kent Soo Hoo; Donny Tjandra; J. C. Fu; Daniel H. Lowenstein (Neuroinformatics, 2004)

DBMap: a space-conscious data visualization and knowledge discovery framework for biomedical data warehouse. - Ming Zhang; Hong Zhang; Donny Tjandra; Stephen T. C. Wong (IEEE Trans. Inf. Technol. Biomed., 2004)

Automated dynamic cellular analysis in high throughput drug screens. - Xiaowei Chen; Stephen T. C. Wong (ISCAS (5), 2005)

A computer-based system to analyze neuron images. - Xiaoyin Xu; Xiaowei Chen; Kuang-Yu Liu; Jinmin Zhu; Xiaobo Zhou 001; Stephen T. C. Wong (ISCAS (5), 2005)

Dynamic sub-cellular behavior study in high content imaging using a multi-threshold approach. - Xiaobo Zhou 001; Stephen T. C. Wong (ISCAS (5), 2005)

Robust Stability for Delayed Neural Networks with Nonlinear Perturbation. - Li Xie; Tianming Liu 001; Jilin Liu; WeiKang Gu; Stephen T. C. Wong (ISNN (1), 2005)

Model the Relationship Between Gene Expression and TFBSs Using a Simplified Neural Network with Bayesian Variable Selection. - Xiaobo Zhou 001; Kuang-Yu Liu; Guangqin Li; Stephen T. C. Wong (ISNN (3), 2005)

Towards Automated Cellular Image Segmentation for RNAi Genome-Wide Screening. - Xiaobo Zhou 001; Kuang-Yu Liu; Pamela Bradley; Norbert Perrimon; Stephen T. C. Wong (MICCAI, 2005)

Emerging biomedical technologies at the micro and nano levels. - Stephen T. C. Wong; Jie Chen 002 (IEEE Signal Process. Mag., 2005)

Robust Feature Extraction and Reduction of Mass Spectrometry Data for Cancer Classification. - Tuan D. Pham; Vikram Chandramohan; Xiaobo Zhou 001; Stephen T. C. Wong (ICDM Workshops, 2006)

Segmentation of Drosophila RNAI Fluorescence Images Using Level Sets. - Guanglei Xiong; Xiaobo Zhou 001; Liang Ji; Pamela Bradley; Norbert Perrimon; Stephen T. C. Wong (ICIP, 2006)

An Effective System for Optical Microscopy Cell Image Segmentation, Tracking and Cell Phase Identification. - Jun Yan 001; Xiaobo Zhou 001; Qiong Yang; Ning Liu 001; QianSheng Cheng; Stephen T. C. Wong (ICIP, 2006)

Shape-constrained repulsive snake method to segment and track neurons in 3D microscopy images. - Hongmin Cai; Xiaoyin Xu; Ju Lu; Jeff Lichtman; S. P. Yung; Stephen T. C. Wong (ISBI, 2006)

Brain tissue segmentation based on DWI/DTI data. - Hai Li 006; Tianming Liu 001; Geoffrey S. Young; Lei Guo 002; Stephen T. C. Wong (ISBI, 2006)

Deformation invariant attribute vector for 3D image registration: method and validation. - Gang Li 001; Tianming Liu 001; Geoffrey S. Young; Lei Guo 002; Stephen T. C. Wong (ISBI, 2006)

Least square conformal mapping with spring energy. - Jingxin Nie; Tianming Liu 001; Geoffrey S. Young; Lei Guo 002; Stephen T. C. Wong (ISBI, 2006)

Automated labeling of neurites in fluorescence microscopy images. - Guanglei Xiong; Xiaobo Zhou 001; Liang Ji; Alexei Degterev; Stephen T. C. Wong (ISBI, 2006)

A shape analysis method to detect dendritic spine in 3D optical microscopy image. - Xiaoyin Xu; Jie Cheng; Rochelle M. Witt; Bernardo L. Sabatini; Stephen T. C. Wong (ISBI, 2006)

Stochastic Robust Stability Analysis for Markovian Jump Discrete-Time Delayed Neural Networks with Multiplicative Nonlinear Perturbations. - Li Xie; Tianming Liu 001; Guodong Lu; Jilin Liu; Stephen T. C. Wong (ISNN (1), 2006)

Identification of Cell-Cycle Phases Using Neural Network and Steerable Filter Features. - Xiaodong Yang; Houqiang Li; Xiaobo Zhou 001; Stephen T. C. Wong (ISNN (2), 2006)

Automated Recognition of Cellular Phenotypes by Support Vector Machines with Feature Reduction. - Yong Mao; Zheng Xia; Daoying Pi; Xiaobo Zhou 001; Youxian Sun; Stephen T. C. Wong (KES (1), 2006)

Gene Selection Using Gaussian Kernel Support Vector Machine Based Recursive Feature Elimination with Adaptive Kernel Width Strategy. - Yong Mao; Xiaobo Zhou 001; Zheng Yin; Daoying Pi; Youxian Sun; Stephen T. C. Wong (RSKT, 2006)

Protein structure similarity from principle component correlation analysis. - Xiaobo Zhou 001; James Chou; Stephen T. C. Wong (BMC Bioinform., 2006)

Integrated Algorithms for Image Analysis and Classification of Nuclear Division for High-Content Cell-Cycle Screening. - Tuan D. Pham; Dat Tran 001; Xiaobo Zhou 001; Stephen T. C. Wong (Int. J. Comput. Intell. Appl., 2006)

A computerized cellular imaging system for high content analysis in Monastrol suppressor screens. - Xiaobo Zhou 001; Xinhua Cao; Zach Perlman; Stephen T. C. Wong (J. Biomed. Informatics, 2006)

Repulsive force based snake model to segment and track neuronal axons in 3D microscopy image stacks. - Hongmin Cai; Xiaoyin Xu; Ju Lu; Jeff W. Lichtman; S. P. Yung; Stephen T. C. Wong (NeuroImage, 2006)

76-Space analysis of grey matter diffusivity: Methods and applications. - Tianming Liu 001; Geoffrey S. Young; Ling Huang; Nankuei Chen; Stephen T. C. Wong (NeuroImage, 2006)

Bayesian variable selection for gene expression modeling with regulatory motif binding sites in neuroinflammatory events. - Kuang-Yu Liu; Xiaobo Zhou 001; Kinhong Kan; Stephen T. C. Wong (Neuroinformatics, 2006)

Genotype-image phenotype studies in neuroscience. - Stephen T. C. Wong (Neuroinformatics, 2006)

Mutual information-based feature selection in studying perturbation of dendritic structure caused by TSC2 inactivation. - Xiaobo Zhou 001; Jinmin Zhu; Kuang-Yu Liu; Bernardo L. Sabatini; Stephen T. C. Wong (Neuroinformatics, 2006)

Taking pictures with E. coli: signal processing using synthetic biology. - Matthew Levy; Jeffrey J. Tabor; Stephen T. C. Wong (IEEE Signal Process. Mag., 2006)

Optical microscopic image processing of dendritic spines morphology. - Xiaoyin Xu; Stephen T. C. Wong (IEEE Signal Process. Mag., 2006)

Informatics challenges of high-throughput microscopy. - Xiaobo Zhou 001; Stephen T. C. Wong (IEEE Signal Process. Mag., 2006)

Automated segmentation, classification, and tracking of cancer cell nuclei in time-lapse microscopy. - Xiaowei Chen; Xiaobo Zhou 001; Stephen T. C. Wong (IEEE Trans. Biomed. Eng., 2006)

A New Nonlinear Diffusion Method to Improve Image Quality. - Yue Zhang; Xiaoyin Xu; Hongmin Cai; S. P. Yung; Stephen T. C. Wong (ICIP (1), 2007)

A 3D Self-Adjust Region Growing Method for Axon Extraction. - Kai Zhang; Hongkai Xiong; Xiaobo Zhou 001; Stephen T. C. Wong (ICIP (2), 2007)

Tracking of Migrating Glioma Cells in Feature Space. - Wenjia Bai; Xiaobo Zhou 001; Jinmin Zhu; Liang Ji; Stephen T. C. Wong (ISBI, 2007)

Graph Cut Based Active Contour for Automated Cellular Image Segmentation in High Throughput Rna Interface (rnai) Screening. - Cheng Chen; Houqiang Li; Xiaobo Zhou 001; Stephen T. C. Wong (ISBI, 2007)

Deformable Registration of Dti and Spgr Images. - Hai Li 006; Tianming Liu 001; Lei Guo 002; Stephen T. C. Wong (ISBI, 2007)

Segmentation of Touching Cells Using Gradient Flow Tracking. - Gang Li 001; Tianming Liu 001; Jingxin Nie; Lei Guo 002; Stephen T. C. Wong (ISBI, 2007)

Reconstruction of Central Cortical Surface from Brain Mri Images: Method and Application. - Jingxin Nie; Tianming Liu 001; Lei Guo 002; Stephen T. C. Wong (ISBI, 2007)

3-D Centerline Extraction of Axons in Microscopic Stacks for the Study of Motor Neuron Behavior in Developing Muscles. - Ranga Srinivasan; Xiaobo Zhou 001; Eric L. Miller 001; Ju Lu; Jeff Lichtman; Stephen T. C. Wong (ISBI, 2007)

Novel Cell Segmentation and Online Learning Algorithms for Cell Phase Identification in Automated Time-lapse Microscopy. - Meng Wang; Xiaobo Zhou 001; Fuhai Li 001; Jeremy F. Huckins; Randy W. King; Stephen T. C. Wong (ISBI, 2007)

Dynamic Local Tracing for 3d Axon Curvilinear Structure Detection from Microscopic Image Stack. - Jun Wang 006; Xiaobo Zhou 001; Ju Lu; Jeff Lichtman; Shih-Fu Chang; Stephen T. C. Wong (ISBI, 2007)

Using Coherent Anti-Stokes Raman Scattering (CARS) to Image Brain Tissues. - Xiaoyin Xu; Conor L. Evans; Geoffrey S. Young; Jian Chen; Santosh Kesari; X. Sunney Xie; Stephen T. C. Wong (ISBI, 2007)

Automated Spine Detection Using Curvilinear Structure Detector and LDA Classifier. - Yong Zhang 050; Xiaobo Zhou 001; Rochelle M. Witt; Bernardo L. Sabatini; Donald A. Adjeroh; Stephen T. C. Wong (ISBI, 2007)

Enabling Technologies in Drug Delivery and Clinical Care. - Andreas G. Andreou; Jie Chen 002; Pau-Choo Chung; Stephen T. C. Wong (ISCAS, 2007)

Study of CuO Nanoparticle-induced Cell Death by High Content Cellular Fluorescence Imaging and Analysis. - Xiaobo Zhou 001; Jian Chen; Jinmin Zhu; Fuhai Li 001; Xudong Huang; Stephen T. C. Wong (ISCAS, 2007)

Detecting Biomarkers for Major Adverse Cardiac Events Using SVM with PLS Feature Selection and Extraction. - Zheng Yin; Xiaobo Zhou 001; Honghui Wang; Youxian Sun; Stephen T. C. Wong (ISNN (2), 2007)

Registration of 3D FMT and CT Images of Mouse Via Affine Transformation with Bayesian Iterative Closest Points. - Xia Zheng; Xiaobo Zhou 001; Youxian Sun; Stephen T. C. Wong (ISNN (2), 2007)

Context based mixture model for cell phase identification in automated fluorescence microscopy. - Meng Wang; Xiaobo Zhou 001; Randy W. King; Stephen T. C. Wong (BMC Bioinform., 2007)

Least-square conformal brain mapping with spring energy. - Jingxin Nie; Tianming Liu 001; Gang Li 001; Geoffrey S. Young; Ashley Tarokh; Lei Guo 002; Stephen T. C. Wong (Comput. Medical Imaging Graph., 2007)

Automated recognition of cellular phenotypes by support vector machines with feature reduction. - Zheng Xia; Xiaobo Zhou 001; Zheng Yin; Youxian Sun; Stephen T. C. Wong; Yong Mao (Int. J. Knowl. Based Intell. Eng. Syst., 2007)

Brain tissue segmentation based on DTI data. - Tianming Liu 001; Hai Li 006; Kelvin K. Wong; Ashley Tarokh; Lei Guo 002; Stephen T. C. Wong (NeuroImage, 2007)

Dendritic spine detection using curvilinear structure detector and LDA classifier. - Yong Zhang 050; Xiaobo Zhou 001; Rochelle M. Witt; Bernardo L. Sabatini; Donald A. Adjeroh; Stephen T. C. Wong (NeuroImage, 2007)

Automated neurite extraction using dynamic programming for high-throughput screening of neuron-based assays. - Yong Zhang 050; Xiaobo Zhou 001; Alexei Degterev; Marta Lipinski; Donald A. Adjeroh; Junying Yuan; Stephen T. C. Wong (NeuroImage, 2007)

Automated Axon Tracking of 3D Confocal Laser Scanning Microscopy Images Using Guided Probabilistic Region Merging. - Ranga Srinivasan; Xiaobo Zhou 001; Eric L. Miller 001; Ju Lu; Jeff Litchman; Stephen T. C. Wong (Neuroinformatics, 2007)

Nanotechnology for genomic signal processing in cancer research - A focus on the genomic signal processing hardware design of the nanotools for cancer ressearch. - Jie Chen 002; Stephen T. C. Wong (IEEE Signal Process. Mag., 2007)

Active microscopic cellular image annotation by superposable graph transduction with imbalanced labels. - Jun Wang 006; Shih-Fu Chang; Xiaobo Zhou 001; Stephen T. C. Wong (CVPR, 2008)

Reversible jump MCMC approach for peak identification for stroke SELDI mass spectrometry using mixture model. - Yuan Wang; Xiaobo Zhou 001; Honghui Wang; King C. Li; Lixiu Yao; Stephen T. C. Wong (ISMB, 2008)

Classification of Mass Spectrometry Based Protein Markers by Kriging Error Matching. - Tuan D. Pham; Honghui Wang; Xiaobo Zhou 001; Dominik Beck; Miriam Brandl; Gerard Hoehn; Joseph Azok; Marie-Luise Brennan; Stanley L. Hazen; Stephen T. C. Wong (MDA, 2008)

Joint Registration and Segmentation of Serial Lung CT Images in Microendoscopy Molecular Image-Guided Therapy. - Zhong Xue; Kelvin K. Wong; Stephen T. C. Wong (MIAR, 2008)

A Novel Method for Cortical Sulcal Fundi Extraction. - Gang Li 001; Tianming Liu 001; Jingxin Nie; Lei Guo 002; Stephen T. C. Wong (MICCAI (1), 2008)

ZFIQ: a software package for zebrafish biology. - Tianming Liu 001; Jingxin Nie; Gang Li 001; Lei Guo 002; Stephen T. C. Wong (Bioinform., 2008)

Novel cell segmentation and online SVM for cell cycle phase identification in automated microscopy. - Meng Wang; Xiaobo Zhou 001; Fuhai Li 001; Jeremy F. Huckins; Randall W. King; Stephen T. C. Wong (Bioinform., 2008)

Using iterative cluster merging with improved gap statistics to perform online phenotype discovery in the context of high-throughput RNAi screens. - Zheng Yin; Xiaobo Zhou 001; Chris Bakal; Fuhai Li 001; Youxian Sun; Norbert Perrimon; Stephen T. C. Wong (BMC Bioinform., 2008)

Classification and Uncertainty Visualization of Dendritic Spines from Optical Microscopy Imaging. - Firdaus Janoos; Boonthanome Nouanesengsy; Xiaoyin Xu; Raghu Machiraju; Stephen T. C. Wong (Comput. Graph. Forum, 2008)

Comparison of Bayesian and regression models in missing enzyme identification. - Bo Geng; Xiaobo Zhou 001; Y. S. Hung; Stephen T. C. Wong (Int. J. Bioinform. Res. Appl., 2008)

Peak detection using peak tree approach for mass spectrometry data. - Peng Zhang 080; Houqiang Li; Xiaobo Zhou 001; Stephen T. C. Wong (Int. J. Hybrid Intell. Syst., 2008)

Comparison of reversible-jump Markov-chain-Monte-Carlo learning approach with other methods for missing enzyme identification. - Bo Geng; Xiaobo Zhou 001; Jinmin Zhu; Y. S. Hung; Stephen T. C. Wong (J. Biomed. Informatics, 2008)

Using nonlinear diffusion and mean shift to detect and connect cross-sections of axons in 3D optical microscopy images. - Hongmin Cai; Xiaoyin Xu; Ju Lu; Jeff Lichtman; S. P. Yung; Stephen T. C. Wong (Medical Image Anal., 2008)

3D Axon Structure Extraction and Analysis in Confocal Fluorescence Microscopy Images. - Yong Zhang 050; Xiaobo Zhou 001; Ju Lu; Jeff Lichtman; Donald A. Adjeroh; Stephen T. C. Wong (Neural Comput., 2008)

Reconstruction of central cortical surface from brain MRI images: Method and application. - Tianming Liu 001; Jingxin Nie; Ashley Tarokh; Lei Guo 002; Stephen T. C. Wong (NeuroImage, 2008)

Workflow and Methods of High-Content Time-Lapse Analysis for Quantifying Intracellular Calcium Signals. - Fuhai Li 001; Xiaobo Zhou 001; Jinmin Zhu; Weiming Xia; Jinwen Ma; Stephen T. C. Wong (Neuroinformatics, 2008)

An Automated Method for Cell Detection in Zebrafish. - Tianming Liu 001; Gang Li 001; Jingxin Nie; Ashley Tarokh; Xiaobo Zhou 001; Lei Guo 002; Jarema Malicki; Weiming Xia; Stephen T. C. Wong (Neuroinformatics, 2008)

Computational Systems Bioinformatics and Bioimaging for Pathway Analysis and Drug Screening. - Xiaobo Zhou 001; Stephen T. C. Wong (Proc. IEEE, 2008)

Computational Prediction Models for Early Detection of Risk of Cardiovascular Events Using Mass Spectrometry Data. - Tuan D. Pham; Honghui Wang; Xiaobo Zhou 001; Dominik Beck; Miriam Brandl; Gerard Hoehn; Joseph Azok; Marie-Luise Brennan; Stanley L. Hazen; King C. Li; Stephen T. C. Wong (IEEE Trans. Inf. Technol. Biomed., 2008)

Registration of 3-D CT and 2-D Flat Images of Mouse via Affine Transformation. - Zheng Xia; Xishi Huang; Xiaobo Zhou 001; Youxian Sun; Vasilis Ntziachristos; Stephen T. C. Wong (IEEE Trans. Inf. Technol. Biomed., 2008)

Automatic Segmentation of High-Throughput RNAi Fluorescent Cellular Images. - Pingkun Yan; Xiaobo Zhou 001; Mubarak Shah; Stephen T. C. Wong (IEEE Trans. Inf. Technol. Biomed., 2008)

Simultaneous Consideration of Spatial Deformation and Tensor Orientation in Diffusion Tensor Image Registration Using Local Fast Marching Patterns. - Hai Li 006; Zhong Xue; Lei Guo 002; Stephen T. C. Wong (IPMI, 2009)

A Novel Surface-Based Geometric Approach for 3D Dendritic Spine Detection from Multi-Photon Excitation Microscopy Images. - Qing Li 008; Xiaobo Zhou 001; Zhigang Deng 001; Matthew Baron; Merille A. Teylan; Yong Kim; Stephen T. C. Wong (ISBI, 2009)

Integrating Multi-Scale Blob/Curvilinear Detector Techniques and Multi-Level Sets for Automated Segmentation of Stem Cell Images. - Huiming Peng; Xiaobo Zhou 001; Fuhai Li 001; Xiaofeng Xia; Stephen T. C. Wong (ISBI, 2009)

Online Three-Dimensional Dendritic Spines Mophological Classification Based on Semi-Supervised Learning. - Peng Shi 004; Xiaobo Zhou 001; Qing Li 008; Matthew Baron; Merille A. Teylan; Yong Kim; Stephen T. C. Wong (ISBI, 2009)

Voles: Vascularity-Oriented Level Set Algorithm for Pulmonary Vessel Segmentation in Image Guided Intervention Therapy. - Xiangjun Zhu; Zhong Xue; Xin Gao; Yisheng Zhu; Stephen T. C. Wong (ISBI, 2009)

Cell Segmentation Using Front Vector Flow Guided Active Contours. - Fuhai Li 001; Xiaobo Zhou 001; Hong Zhao; Stephen T. C. Wong (MICCAI (1), 2009)

Tissue probability map constrained CLASSIC for increased accuracy and robustness in serial image segmentation. - Zhong Xue; Dinggang Shen; Stephen T. C. Wong (Image Processing, 2009)

Conditional random pattern algorithm for LOH inference and segmentation. - Ling-Yun Wu; Xiaobo Zhou 001; Fuhai Li 001; Xiaorong Yang; Chung-Che Chang; Stephen T. C. Wong (Bioinform., 2009)

Automated brain tumor segmentation using spatial accuracy-weighted hidden Markov Random Field. - Jingxin Nie; Zhong Xue; Tianming Liu 001; Geoffrey S. Young; Kian Setayesh; Lei Guo 002; Stephen T. C. Wong (Comput. Medical Imaging Graph., 2009)

An image score inference system for RNAi genome-wide screening based on fuzzy mixture regression modeling. - Jun Wang 006; Xiaobo Zhou 001; Fuhai Li 001; Pamela Bradley; Shih-Fu Chang; Norbert Perrimon; Stephen T. C. Wong (J. Biomed. Informatics, 2009)

Robust 3D reconstruction and identification of dendritic spines from optical microscopy imaging. - Firdaus Janoos; Kishore Mosaliganti; Xiaoyin Xu; Raghu Machiraju; Kun Huang 001; Stephen T. C. Wong (Medical Image Anal., 2009)

An Automated Pipeline for Dendrite Spine Detection and Tracking of 3D Optical Microscopy Neuron Images of In Vivo Mouse Models. - Jing Fan; Xiaobo Zhou 001; Jennifer G. Dy; Yong Zhang 050; Stephen T. C. Wong (Neuroinformatics, 2009)

Automated Axon Tracking of 3D Confocal Laser Scanning Microscopy Images Using Guided Probabilistic Region Merging. - Ranga Srinivasan; Xiaobo Zhou 001; Eric L. Miller 001; Ju Lu; Jeff W. Lichtman; Stephen T. C. Wong (Neuroinformatics, 2009)

Online phenotype discovery based on minimum classification error model. - Zheng Yin; Xiaobo Zhou 001; Youxian Sun; Stephen T. C. Wong (Pattern Recognit., 2009)

Recognition and analysis of cell nuclear phases for high-content screening based on morphological features. - Donggang Yu; Tuan D. Pham; Xiaobo Zhou 001; Stephen T. C. Wong (Pattern Recognit., 2009)

Unraveling the signal-transduction networks in cancer metastasis [Life Sciences]. - Guangxu Jin; Kemi Cui; Xiaobo Zhou 001; Stephen T. C. Wong (IEEE Signal Process. Mag., 2009)

A Novel Cell Segmentation Method and Cell Phase Identification Using Markov Model. - Xiaobo Zhou 001; Fuhai Li 001; Jun Jun Yan; Stephen T. C. Wong (IEEE Trans. Inf. Technol. Biomed., 2009)

Neural stem cell segmentation using local complex phase information. - Taoyi Chen; Yong Zhang 050; Changhong Wang; Zhenshen Qu; Stephen T. C. Wong (ICIP, 2010)

A Minimally Invasive Multimodality Image-Guided (MIMIG) Molecular Imaging System for Peripheral Lung Cancer Intervention and Diagnosis. - Tiancheng He; Zhong Xue; Kelvin K. Wong; Miguel Valdivia y Alvarado; Yong Zhang 050; Weixin Xie; Stephen T. C. Wong (IPCAI, 2010)

PICE: prior information constrained evolution for 3-D and 4-D brain tumor segmentation. - Xiaojun Xue; Zhong Xue; Fei Cao; Ying Zhu; Geoffrey S. Young; Yan Li; Jianhua Yang 005; Stephen T. C. Wong (ISBI, 2010)

Peripheral Lung Cancer Detection by Vascular Tumor Labeling Using In-Vivo Microendoscopy under Real Time 3D CT Image Guided Intervention. - Miguel Valdivia y Alvarado; Tiancheng He; Zhong Xue; Stephen T. C. Wong; Kelvin K. Wong (MIAR, 2010)

A Motion Correction Algorithm for Microendoscope Video Computing in Image-Guided Intervention. - Tiancheng He; Zhong Xue; Weixin Xie; Solomon Wong; Kelvin K. Wong; Miguel Valdivia y Alvarado; Stephen T. C. Wong (MIAR, 2010)

Distinguishing Left or Right Temporal Lobe Epilepsy from Controls Using Fractional Anisotropy Asymmetry Analysis. - Hai Li 006; Zhong Xue; Mario F. Dulay; Amit Verma; Solomon Wong; Christof Karmonik; Robert G. Grossman; Stephen T. C. Wong (MIAR, 2010)

Motion Artifact Correction of Multi-Photon Imaging of Awake Mice Models Using Speed Embedded HMM. - Taoyi Chen; Zhong Xue; Changhong Wang; Zhenshen Qu; Kelvin K. Wong; Stephen T. C. Wong (MICCAI (3), 2010)

Online 4-D CT Estimation for Patient-Specific Respiratory Motion Based on Real-Time Breathing Signals. - Tiancheng He; Zhong Xue; Weixin Xie; Stephen T. C. Wong (MICCAI (3), 2010)

Optimal Live Cell Tracking for Cell Cycle Study Using Time-Lapse Fluorescent Microscopy Images. - Fuhai Li 001; Xiaobo Zhou 001; Stephen T. C. Wong (MLMI, 2010)

Reconstruction of the neuromuscular junction connectome. - Ranga Srinivasan; Qing Li 008; Xiaobo Zhou 001; Ju Lu; Jeff Lichtman; Stephen T. C. Wong (Bioinform., 2010)

Conditional random pattern model for copy number aberration detection. - Fuhai Li 001; Xiaobo Zhou 001; Wanting Huang; Chung-Che Chang; Stephen T. C. Wong (BMC Bioinform., 2010)

Semi-supervised drug-protein interaction prediction from heterogeneous biological spaces. - Zheng Xia; Ling-Yun Wu; Xiaobo Zhou 001; Stephen T. C. Wong (BMC Syst. Biol., 2010)

Image segmentation by EM-based adaptive pulse coupled neural networks in brain magnetic resonance imaging. - J. C. Fu; C. C. Chen; J. W. Chai; Stephen T. C. Wong; I. C. Li (Comput. Medical Imaging Graph., 2010)

Joint registration and segmentation of serial lung CT images for image-guided lung cancer diagnosis and therapy. - Zhong Xue; Kelvin K. Wong; Stephen T. C. Wong (Comput. Medical Imaging Graph., 2010)

A hybrid approach to automatic clustering of white matter fibers. - Hai Li 006; Zhong Xue; Lei Guo 002; Tianming Liu 001; Jill Hunter; Stephen T. C. Wong (NeuroImage, 2010)

A local fast marching-based diffusion tensor image registration algorithm by simultaneously considering spatial deformation and tensor orientation. - Zhong Xue; Hai Li 006; Lei Guo 002; Stephen T. C. Wong (NeuroImage, 2010)

A neurocomputational method for fully automated 3D dendritic spine detection and segmentation of medium-sized spiny neurons. - Yong Zhang 050; Kun Chen; Matthew Baron; Merille A. Teylan; Yong Kim; Zhihuan Song; Paul Greengard; Stephen T. C. Wong (NeuroImage, 2010)

Oriented Markov Random Field Based Dendritic Spine Segmentation for Fluorescence Microscopy Images. - Jie Cheng; Xiaobo Zhou 001; Eric L. Miller 001; Veronica A. Alvarez; Bernardo L. Sabatini; Stephen T. C. Wong (Neuroinformatics, 2010)

Fabrication of Localized Surface Plasmon Resonance Fiber Probes Using Ionic Self-Assembled Gold Nanoparticles. - Miao Wan; Pengfei Luo; Jiayi Jin; Jiong Xing; Zhiyong Wang; Stephen T. C. Wong (Sensors, 2010)

An Automatic and Robust Algorithm of Reestablishment of Digital Dental Occlusion. - Yu-Bing Chang; James J. Xia; Jaime Gateno; Zixiang Xiong; Xiaobo Zhou 001; Stephen T. C. Wong (IEEE Trans. Medical Imaging, 2010)

Multiple Nuclei Tracking Using Integer Programming for Quantitative Cancer Cell Cycle Analysis. - Fuhai Li 001; Xiaobo Zhou 001; Jinwen Ma; Stephen T. C. Wong (IEEE Trans. Medical Imaging, 2010)

Bayesian peptide peak detection for high resolution TOF mass spectrometry. - Jianqiu Zhang 002; Xiaobo Zhou 001; Honghui Wang; Anthony Suffredini; Lin Zhang 015; Yufei Huang 001; Stephen T. C. Wong (IEEE Trans. Signal Process., 2010)

Quantitative synaptic vesicle imaging for evaluating neuron activities in neurodegenerative diseases. - Jing Fan; Xiaofeng Xia; Jennifer G. Dy; Stephen T. C. Wong (ACSCC, 2011)

Coupling Oriented Hidden Markov Random Field Model with Local Clustering for Segmenting Blood Vessels and Measuring Spatial Structures in Images of Tumor Microenvironment. - Yanqiao Zhu 002; Fuhai Li 001; Derek Cridebring; Jinwen Ma; Stephen T. C. Wong; Tegy J. Vadakkan; Mei Zhang; John Landua; Wei Wei; Mary E. Dickinson; Jeffrey M. Rosen; Michael T. Lewis (BIBM, 2011)

Automated Nuclear Segmentation of Coherent Anti-Stokes Raman Scattering Microscopy Images by Coupling Superpixel Context Information with Artificial Neural Networks. - Ahmad A. Hammoudi; Fuhai Li 001; Liang Gao; Zhiyong Wang; Michael J. Thrall; Yehia Massoud; Stephen T. C. Wong (MLMI, 2011)

An enhanced Petri-net model to predict synergistic effects of pairwise drug combinations from gene microarray data. - Guangxu Jin; Hong Zhao; Xiaobo Zhou 001; Stephen T. C. Wong (Bioinform., 2011)

Diffusion tensor-based fast marching for modeling human brain connectivity network. - Hai Li 006; Zhong Xue; Kemi Cui; Stephen T. C. Wong (Comput. Medical Imaging Graph., 2011)

Tissue probability map constrained 4D clustering algorithm for increased accuracy and robustness in SerialMR brain image segmentation. - Zhong Xue; Dinggang Shen; Hai Li 006; Stephen T. C. Wong (Int. J. Medical Eng. Informatics, 2011)

Peak Tree: A New Tool for Multiscale Hierarchical Representation and Peak Detection of Mass Spectrometry Data. - Peng Zhang 080; Houqiang Li; Honghui Wang; Stephen T. C. Wong; Xiaobo Zhou 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2011)

A Global Spatial Similarity Optimization Scheme to Track Large Numbers of Dendritic Spines in Time-Lapse Confocal Microscopy. - Qing Li 008; Zhigang Deng 001; Yong Zhang 050; Xiaobo Zhou 001; U. Valentin Nägerl; Stephen T. C. Wong (IEEE Trans. Medical Imaging, 2011)

Extracting Key Pathways from Gene Signature and Genetic Aberrations in Subtypes of Cancer. - Peikai Chen; Yubo Fan; Tsz-Kwong Man; Ching C. Lau; Y. S. Hung; Stephen T. C. Wong (CIBB, 2012)

An integrative bioinformatics approach for identifying subtypes and subtype-specific drivers in cancer. - Peikai Chen; Y. S. Hung; Yubo Fan; Stephen T. C. Wong (CIBCB, 2012)

A 3-dimentional multiscale model to simulate tumor progression in response to interactions between cancer stem cells and tumor microenvironmental factors. - Hua Tan; Fuhai Li 001; Jaykrishna Singh; Xiaofeng Xia; Derek Cridebring; Jian Yang; Ming Zhan; Stephen T. C. Wong; Jiguang Bao; Jinwen Ma (ISB, 2012)

Three-dimensional dendritic spine detection based on minimal cross-sectional curvature. - Tiancheng He; Zhong Xue; Yong Kim; Stephen T. Wong (ISBI, 2012)

Identification of faulty DTI-based sub-networks in autism using network regularized SVM. - Hai Li 006; Zhong Xue; Timothy M. Ellmore; Richard E. Frye; Stephen T. C. Wong (ISBI, 2012)

Support vector machine (SVM) active learning for automated Glioblastoma segmentation. - Po Su; Zhong Xue; Linda Chi; Jianhua Yang 005; Stephen T. Wong (ISBI, 2012)

Automatic segmentation and centroid detection of skin sensors for lung interventions. - Kongkuo Lu; Sheng Xu 001; Zhong Xue; Stephen T. Wong (Image-Guided Procedures, 2012)

Fast CT-CT fluoroscopy registration with respiratory motion compensation for image-guided lung intervention. - Po Su; Zhong Xue; Kongkuo Lu; Jianhua Yang 005; Stephen T. Wong (Image-Guided Procedures, 2012)

A novel approach for three dimensional dendrite spine segmentation and classification. - Tiancheng He; Zhong Xue; Stephen T. C. Wong (Image Processing, 2012)

Live-wire-based segmentation of (3D) anatomical structures for image-guided lung interventions. - Kongkuo Lu; Sheng Xu 001; Zhong Xue; Stephen T. Wong (Image Processing, 2012)

Motion correction for cellular-resolution multi-photon fluorescence microscopy imaging of awake head-restrained mice using speed embedded HMM. - Taoyi Chen; Zhong Xue; Changhong Wang; Zhenshen Qu; Kelvin K. Wong; Stephen T. C. Wong (Comput. Medical Imaging Graph., 2012)

A minimally invasive multimodality image-guided (MIMIG) system for peripheral lung cancer intervention and diagnosis. - Tiancheng He; Zhong Xue; Kongkuo Lu; Miguel Valdivia y Alvarado; Kelvin K. Wong; Weixin Xie; Stephen T. C. Wong (Comput. Medical Imaging Graph., 2012)

A quantitative analytic pipeline for evaluating neuronal activities by high-throughput synaptic vesicle imaging. - Jing Fan; Xiaofeng Xia; Ying Li; Jennifer G. Dy; Stephen T. C. Wong (NeuroImage, 2012)

A quantitative analysis of F-actin features and distribution in fluorescence microscopy images to distinguish cells with different modes of motility. - Jie Cheng; Xiaoping Zhu; Hao Cheng; Hong Zhao; Stephen T. C. Wong (EMBC, 2013)

A robust semi-automatic approach for ROI segmentation in 3D CT images. - Kongkuo Lu; Zhong Xue; Stephen T. Wong (EMBC, 2013)

Analyzing grey matter diffusivity of autism in the context of white matter connectivity. - Hai Li 006; Zhong Xue; Timothy M. Ellmore; Richard E. Frye; Stephen T. Wong (ISBI, 2013)

A Novel Geodesic Distance Based Clustering Approach to Delineating Boundaries of Touching Cells. - Xu Chen; Yanqiao Zhu 002; Fuhai Li 001; Zeyi Zheng; Eric Chang; Jinwen Ma; Stephen T. C. Wong (ISNN (2), 2013)

Helical Mode Lung 4D-CT Reconstruction Using Bayesian Model. - Tiancheng He; Zhong Xue; Paige L. Nitsch; Bin S. Teh; Stephen T. Wong (MICCAI (3), 2013)

Superpixel-Based Segmentation of Glioblastoma Multiforme from Multimodal MR Images. - Po Su; Jianhua Yang 005; Hai Li 006; Linda Chi; Zhong Xue; Stephen T. Wong (MBIA, 2013)

Simultaneous Tensor and Fiber Registration (STFR) for Diffusion Tensor Images of the Brain. - Zhong Xue; Stephen T. C. Wong (AE-CAI, 2013)

DrugMap Central: an on-line query and visualization tool to facilitate drug repositioning studies. - Changhe Fu; Guangxu Jin; Junfeng Gao; Rui Zhu; Efren Ballesteros-Villagrana; Stephen T. C. Wong (Bioinform., 2013)

A gene signature based method for identifying subtypes and subtype-specific drivers in cancer with an application to medulloblastoma. - Peikai Chen; Yubo Fan; Tsz-Kwong Man; Y. S. Hung; Ching C. Lau; Stephen T. C. Wong (BMC Bioinform., 2013)

A 3D multiscale model of cancer stem cell in tumor development. - Fuhai Li 001; Hua Tan; Jaykrishna Singh; Jian Yang; Xiaofeng Xia; Jiguang Bao; Jinwen Ma; Ming Zhan; Stephen T. C. Wong (BMC Syst. Biol., 2013)

Chapter 17: Bioimage Informatics for Systems Pharmacology. - Fuhai Li 001; Zheng Yin; Guangxu Jin; Hong Zhao; Stephen T. C. Wong (PLoS Comput. Biol., 2013)

A Fast CT and CT-Fluoroscopy Registration Algorithm With Respiratory Motion Compensation for Image-Guided Lung Intervention. - Po Su; Jianhua Yang 005; Kongkuo Lu; Nam Yu; Stephen T. Wong; Zhong Xue (IEEE Trans. Biomed. Eng., 2013)

Estimating Dynamic Lung Images from High-Dimension Chest Surface Motion Using 4D Statistical Model. - Tiancheng He; Zhong Xue; Nam Yu; Paige L. Nitsch; Bin S. Teh; Stephen T. Wong (MICCAI (2), 2014)

Spatial-Temporal Image-Constrained Lung 4D-CT Reconstruction for Radiotherapy Planning. - Tiancheng He; Zhong Xue; Nam Yu; Bin S. Teh; Stephen T. Wong (CLIP@MICCAI, 2014)

An Integrated Analytic Pipeline for Identifying and Predicting Genetic Interactions based on Perturbation Data from High Content Double RNAi Screening. - Zheng Yin; Fuhai Li 001; Stephen T. C. Wong (XSEDE, 2014)

DrugComboRanker: drug combination discovery based on target network analysis. - Lei Huang; Fuhai Li 001; Jianting Sheng; Xiaofeng Xia; Jinwen Ma; Ming Zhan; Stephen T. C. Wong (Bioinform., 2014)

Fractional anisotropy asymmetry and the side of seizure origin for partial onset-temporal lobe epilepsy. - Hai Li 006; Zhong Xue; Mario F. Dulay; Amit Verma; Christof Karmonik; Robert G. Grossman; Stephen T. C. Wong (Comput. Medical Imaging Graph., 2014)

Enhanced Petri Net: elucidating the pathway-level mechanism of targeted-therapy drugs. - Guangxu Jin; Stephen T. C. Wong (it Inf. Technol., 2014)

Guest Editorial - Special Issue on '-Omics' Based Companion Diagnostics for Personalized Medicine. - Jie Chen 002; Shankar Subramaniam; David S. Wishart; Stephen T. Wong (IEEE Trans. Biomed. Circuits Syst., 2014)

Guest Editorial: Computational Solutions to Large-Scale Data Management and Analysis in Translational and Personalized Medicine. - Manolis Tsiknakis; Vasilis J. Promponas; Norbert M. Graf; May D. Wang; Stephen T. C. Wong; Nikolaos G. Bourbakis; Constantinos S. Pattichis (IEEE J. Biomed. Health Informatics, 2014)

Accurate segmentation of touching cells in multi-channel microscopy images with geodesic distance based clustering. - Xu Chen; Yanqiao Zhu 002; Fuhai Li 001; Zeyi Zheng; Eric C. Chang; Jinwen Ma; Stephen T. C. Wong (Neurocomputing, 2015)

METEOR: An Enterprise Health Informatics Environment to Support Evidence-Based Medicine. - Mamta Puppala; Tiancheng He; Shenyi Chen; Richard Ogunti; Xiaohui Yu 003; Fuhai Li 001; Robert Jackson; Stephen T. C. Wong (IEEE Trans. Biomed. Eng., 2015)

Editorial: Big Data for Health. - R. Atun; Yves A. Lussier; Carmen C. Y. Poon; Stephen T. C. Wong; Guang-Zhong Yang (IEEE J. Biomed. Health Informatics, 2015)

Big Data for Health. - Javier Andreu-Perez; Carmen C. Y. Poon; Robert D. Merrifield; Stephen T. C. Wong; Guang-Zhong Yang (IEEE J. Biomed. Health Informatics, 2015)

Optimal Drug Prediction From Personal Genomics Profiles. - Jianting Sheng; Fuhai Li 001; Stephen T. C. Wong (IEEE J. Biomed. Health Informatics, 2015)

A smartphone app framework for segmented cancer care coordination. - Tiancheng He; Richard Ogunti; Mamta Puppala; Shenyi Chen; Xiaohui Yu 003; James J. Mancuso; Stephen T. C. Wong (BHI, 2016)

A three-dimensional medical image segmentation app using graphic theory. - Tiancheng He; Zhong Xue; Stephen T. Wong (BHI, 2016)

DrugMoaMiner: A computational tool for mechanism of action discovery and personalized drug sensitivity prediction. - Fuhai Li 001; Lin Wang 065; Ren Kong; Jianting Sheng; Huojun Cao; James J. Mancuso; Xiaofeng Xia; Clifford Stephan; Stephen T. C. Wong (BHI, 2016)

When discriminative K-means meets Grassmann manifold: Disease gene identification via a general multi-view clustering method. - Danping Li; Lei Wang 079; Zhong Xue; Stephen T. C. Wong (BHI, 2016)

Data security and privacy management in healthcare applications and clinical data warehouse environment. - Mamta Puppala; Tiancheng He; Xiaohui Yu 003; Shenyi Chen; Richard Ogunti; Stephen T. C. Wong (BHI, 2016)

Transductive Maximum Margin Classification of ADHD Using Resting State fMRI. - Lei Wang 079; Danping Li; Tiancheng He; Stephen T. C. Wong; Zhong Xue (MLMI@MICCAI, 2016)

Deep learning analytics for diagnostic support of breast cancer disease management. - Tiancheng He; Mamta Puppala; Richard Ogunti; James J. Mancuso; Xiaohui Yu 003; Shenyi Chen; Jenny C. Chang; Tejal A. Patel; Stephen T. C. Wong (BHI, 2017)

Precise calibration for the coordinates of surgical needle's tip based on transform invariant matrix and spherical constraints. - Jing Jin; Liwei Zhang; Hongzhi Wang 007; Stephen T. C. Wong; Hai Li 006 (BHI, 2017)

Transductive local fisher discriminant analysis for gene expression profile-based cancer classification. - Danping Li; Lei Wang 079; Jiajun Wang; Zhong Xue; Stephen T. C. Wong (BHI, 2017)

Dynamic Respiratory Motion Estimation Using Patch-Based Kernel-PCA Priors for Lung Cancer Radiotherapy. - Tiancheng He; Ramiro Pino; Bin S. Teh; Stephen T. Wong; Zhong Xue (CMMI/RAMBO/SWITCH@MICCAI, 2017)

An image informatics pipeline for imaging mass cytometry to characterize the immune landscape in pre- and on-treatment immune therapy and its application in recurrent platinium-resistant epithelial ovarian cancer. - Ying Zhu; Tsz-Lun Yeung; Jianting Sheng; Emily M. Hinchcliff; Jared K. Burks; Amir A. Jazaeri; Samuel C. Mok; Stephen T. C. Wong (BHI, 2019)

Non-rigid Registration of White Matter Tractography Using Coherent Point Drift Algorithm. - Wenjuan Wang; Jin Liu 022; Tengfei Wang; Zongtao Hu; Li Xia; Hongzhi Wang 007; Lizhuang Yang; Stephen T. C. Wong; Xiaochu Zhang; Hai Li 006 (MBIA/MFCA@MICCAI, 2019)

Driver network as a biomarker: systematic integration and network modeling of multi-omics data to derive driver signaling pathways for drug combination prediction. - Lei Huang; David Brunell; Clifford Stephan; James J. Mancuso; Xiaohui Yu 003; Bin He; Timothy C. Thompson; Ralph Zinner; Jeri Kim; Peter Davies 002; Stephen T. C. Wong (Bioinform., 2019)

Preventing inpatient falls with injuries using integrative machine learning prediction: a cohort study. - Lin Wang 065; Zhong Xue; Chika F. Ezeana; Mamta Puppala; Shenyi Chen; Rebecca L. Danforth; Xiaohui Yu 003; Tiancheng He; Mark L. Vassallo; Stephen T. C. Wong (npj Digit. Medicine, 2019)

A multi-scale level set method based on local features for segmentation of images with intensity inhomogeneity. - Hai Min; Li Xia; Junwei Han 001; Xiaofeng Wang; Qianqian Pan; Hao Fu; Hongzhi Wang 007; Stephen T. C. Wong; Hai Li 006 (Pattern Recognit., 2019)

Toward Rapid Stroke Diagnosis with Multimodal Deep Learning. - Mingli Yu; Tongan Cai; Xiaolei Huang 001; Kelvin K. Wong; John Volpi; James Z. Wang 001; Stephen T. C. Wong (MICCAI (3), 2020)

[Guest Editorial]. - Vincent S. Tseng; Stephen T. C. Wong; Diane J. Cook; Jiming Liu 001 (IEEE Comput. Intell. Mag., 2020)

Computational Intelligence Techniques for Combating COVID-19: A Survey. - Vincent S. Tseng; Josh Jia-Ching Ying; Stephen T. C. Wong; Diane J. Cook; Jiming Liu 001 (IEEE Comput. Intell. Mag., 2020)

Evaluation of Inference Attack Models for Deep Learning on Medical Data. - Maoqiang Wu; Xinyue Zhang 001; Jiahao Ding; Hien Van Nguyen; Rong Yu 001; Miao Pan; Stephen T. Wong (CoRR, 2020)

SCOR: A secure international informatics infrastructure to investigate COVID-19. - Jean Louis Raisaro; Francesco Marino; Juan Ramón Troncoso-Pastoriza; Raphaelle Beau-Lejdstrom; Riccardo Bellazzi; Robert Murphy; Elmer V. Bernstam; Henry Wang; Mauro Bucalo; Yong Chen 016; Assaf Gottlieb; Arif Ozgun Harmanci; et al. (J. Am. Medical Informatics Assoc., 2020)

Multimodal Breast Lesion Classification Using Cross-Attention Deep Networks. - Hung Q. Vo; Pengyu Yuan; Tiancheng He; Stephen T. C. Wong; Hien Van Nguyen (BHI, 2021)

An Intelligent Augmented Lifelike Avatar App for Virtual Physical Examination of Suspected Strokes. - Kevin Yao; Kelvin K. Wong; Xiaohui Yu 003; John Volpi; Stephen T. C. Wong (EMBC, 2021)

LambdaUNet: 2.5D Stroke Lesion Segmentation of Diffusion-Weighted MR Images. - Yanglan Ou; Ye Yuan; Xiaolei Huang 001; Kelvin K. Wong; John Volpi; James Z. Wang 001; Stephen T. C. Wong (MICCAI (1), 2021)

Adaptive Privacy Preserving Deep Learning Algorithms for Medical Data. - Xinyue Zhang 001; Jiahao Ding; Maoqiang Wu; Stephen T. C. Wong; Hien Van Nguyen; Miao Pan (WACV, 2021)

An imageomics and multi-network based deep learning model for risk assessment of liver transplantation for hepatocellular cancer. - Tiancheng He; Joy Nolte Fong; Linda W. Moore; Chika F. Ezeana; David Victor; Mukul Divatia; Matthew Vasquez; R. Mark Ghobrial; Stephen T. C. Wong (Comput. Medical Imaging Graph., 2021)

Deep learning powers cancer diagnosis in digital pathology. - Yunjie He; Hong Zhao; Stephen T. C. Wong (Comput. Medical Imaging Graph., 2021)

Retrospective study of deep learning to reduce noise in non-contrast head CT images. - Kelvin K. Wong; Jonathon S. Cummock; Yunjie He; Rahul Ghosh; John Volpi; Stephen T. C. Wong (Comput. Medical Imaging Graph., 2021)

DeepStroke: An Efficient Stroke Screening Framework for Emergency Rooms with Multimodal Adversarial Deep Learning. - Tongan Cai; Haomiao Ni; Mingli Yu; Xiaolei Huang 001; Kelvin K. Wong; John Volpi; James Z. Wang 001; Stephen T. C. Wong (CoRR, 2021)

Memory-Augmented Capsule Network for Adaptable Lung Nodule Classification. - Aryan Mobiny; Pengyu Yuan; Pietro Antonio Cicalese; Supratik Moulik; Naveen Garg; Carol C. Wu; Kelvin K. Wong; Stephen T. Wong; Tiancheng He; Hien Van Nguyen (IEEE Trans. Medical Imaging, 2021)

Asymmetry Disentanglement Network for Interpretable Acute Ischemic Stroke Infarct Segmentation in Non-contrast CT Scans. - Haomiao Ni; Yuan Xue 002; Kelvin K. Wong; John Volpi; Stephen T. C. Wong; James Z. Wang 001; Xiaolei Huang 001 (MICCAI (8), 2022)

Patcher: Patch Transformers with Mixture of Experts for Precise Medical Image Segmentation. - Yanglan Ou; Ye Yuan; Xiaolei Huang 001; Stephen T. C. Wong; John Volpi; James Z. Wang 001; Kelvin K. Wong (MICCAI (5), 2022)

hDirect-MAP: projection-free single-cell modeling of response to checkpoint immunotherapy. - Yong Lu; Gang Xue; Ningbo Zheng; Kun Han; Wenzhong Yang; Rui-Sheng Wang; Ling-Yun Wu; Lance D. Miller; Timothy Pardee; Pierre L. Triozzi; Hui-Wen Lo; Kounosuke Watabe; et al. (Briefings Bioinform., 2022)

A personalized image-guided intervention system for peripheral lung cancer on patient-specific respiratory motion model. - Tengfei Wang; Tiancheng He; Zhenglin Zhang; Qi Chen; Liwei Zhang; Guoren Xia; Lizhuang Yang; Hongzhi Wang 007; Stephen T. C. Wong; Hai Li 006 (Int. J. Comput. Assist. Radiol. Surg., 2022)

DeepStroke: An efficient stroke screening framework for emergency rooms with multimodal adversarial deep learning. - Tongan Cai; Haomiao Ni; Mingli Yu; Xiaolei Huang 001; Kelvin K. Wong; John Volpi; James Z. Wang 001; Stephen T. C. Wong (Medical Image Anal., 2022)

A Time-Series Feature-Based Recursive Classification Model to Optimize Treatment Strategies for Improving Outcomes and Resource Allocations of COVID-19 Patients. - Lin Wang 065; Zheng Yin; Mamta Puppala; Chika F. Ezeana; Kelvin K. Wong; Tiancheng He; Deepa B. Gotur; Stephen T. C. Wong (IEEE J. Biomed. Health Informatics, 2022)

Storyline-Centric Detection of Aphasia and Dysarthria in Stroke Patient Transcripts. - Peiqi Sui; Kelvin K. Wong; Xiaohui Yu 003; John Volpi; Stephen T. C. Wong (ClinicalNLP@ACL, 2023)

BBox-Guided Segmentor: Leveraging expert knowledge for accurate stroke lesion segmentation using weakly supervised bounding box prior. - Yanglan Ou; Sharon X. Huang; Kelvin K. Wong; Jonathon S. Cummock; John Volpi; James Z. Wang 001; Stephen T. C. Wong (Comput. Medical Imaging Graph., 2023)

Artificial Intelligence-Powered Acoustic Analysis System for Dysarthria Severity Assessment. - Zhenglin Zhang; Xiaolong Shang; Lizhuang Yang; Wenlong Ai; Jiawei Wang; Hongzhi Wang 007; Stephen T. C. Wong; Xun Wang; Hai Li 006 (Adv. Intell. Syst., 2023)

M3 Stroke: Multi-Modal Mobile AI for Emergency Triage of Mild to Moderate Acute Strokes. - Tongan Cai; Kelvin K. Wong; James Z. Wang 001; Sharon X. Huang; Xiaohui Yu 003; John Volpi; Stephen T. C. Wong (BHI, 2024)

MUSTANG: Multi-sample spatial transcriptomics data analysis with cross-sample transcriptional similarity guidance. - Seyednami Niyakan; Jianting Sheng; Yuliang Cao; Xiang Zhang; Zhan Xu; Ling Wu; Stephen T. C. Wong; Xiaoning Qian (Patterns, 2024)

Detecting Wilson's disease from unstructured connected speech: An embedding-based approach augmented by attention and bi-directional dependency. - Zhenglin Zhang; Lizhuang Yang; Xun Wang; Hongzhi Wang 007; Stephen T. C. Wong; Hai Li 006 (Speech Commun., 2024)

SafeTriage: Facial Video De-identification for Privacy-Preserving Stroke Triage. - Tongan Cai; Haomiao Ni; Wenchao Ma; Yuan Xue 002; Qian Ma; Rachel Leicht; Kelvin K. Wong; John Volpi; Stephen T. C. Wong; James Z. Wang 001; Sharon X. Huang (IPMI (2), 2025)

A novel population-characteristic weighted sparse model for accurate respiratory motion prediction in CT-guided lung cancer interventions. - Guoren Xia; Tengfei Wang; Jun Xu 033; Xiaoyang Li; Hongzhi Wang 007; Stephen T. C. Wong; Hai Li 006 (Comput. Medical Imaging Graph., 2025)

Contrastive learning in brain imaging. - Xiaoyin Xu; Stephen T. C. Wong (Comput. Medical Imaging Graph., 2025)

Revisiting Invariant Learning for Out-of-Domain Generalization on Multi-Site Mammogram Datasets. - Hung Q. Vo; Samira Zare; Son T. Ly; Lin Wang 065; Chika F. Ezeana; Xiaohui Yu 003; Kelvin K. Wong; Stephen T. C. Wong; Hien Van Nguyen (CoRR, 2025)

MIRAM: Masked Image Reconstruction Across Multiple Scales for Breast Lesion Risk Prediction. - Hung Q. Vo; Pengyu Yuan; Zheng Yin; Kelvin K. Wong; Chika F. Ezeana; Son T. Ly; Stephen T. C. Wong; Hien Van Nguyen (CoRR, 2025)

Frozen Large-Scale Pretrained Vision-Language Models are the Effective Foundational Backbone for Multimodal Breast Cancer Prediction. - Hung Q. Vo; Lin Wang 065; Kelvin K. Wong; Chika F. Ezeana; Xiaohui Yu 003; Wei Yang; Jenny C. Chang; Hien Van Nguyen; Stephen T. C. Wong (IEEE J. Biomed. Health Informatics, 2025)