DNA Molecule Classification Using Feature Primitives. - Raja Tanveer Iqbal; Matthew Landry; Stephen Winters-Hilt (BMC Bioinform., 2006)

Hidden Markov Model Variants and their Application. - Stephen Winters-Hilt (BMC Bioinform., 2006)

Nanopore Detector based analysis of single-molecule conformational kinetics and binding interactions. - Stephen Winters-Hilt (BMC Bioinform., 2006)

Cheminformatics methods for novel nanopore analysis of HIV DNA termini. - Stephen Winters-Hilt; Matthew Landry; Mark Akeson; Maria Tanase; Iftekhar Amin; Amy Coombs; Eric Morales; John Millet; Carl Baribault; Srikanth Sendamangalam (BMC Bioinform., 2006)

Support Vector Machine Implementations for Classification & Clustering. - Stephen Winters-Hilt; Anil Yelundur; Charlie McChesney; Matthew Landry (BMC Bioinform., 2006)

Proceedings of the Third Annual Conference of the MidSouth Computational Biology and Bioinformatics Society. - Jonathan D. Wren; Yuriy Gusev; Andrey A. Ptitsyn; Stephen Winters-Hilt (BMC Bioinform., 2006)

Duration learning for analysis of nanopore ionic current blockades. - Alexander G. Churbanov; Carl Baribault; Stephen Winters-Hilt (BMC Bioinform., 2007)

Analysis of nanopore detector measurements using Machine-Learning methods, with application to single-molecule kinetic analysis. - Matthew Landry; Stephen Winters-Hilt (BMC Bioinform., 2007)

Preliminary nanopore cheminformatics analysis of aptamer-target binding strength. - Karen Thomson; Iftekhar Amin; Eric Morales; Stephen Winters-Hilt (BMC Bioinform., 2007)

Proceedings of the Fourth Annual Conference of the MidSouth Computational Biology and Bioinformatics Society. - Dawn Wilkins; Yuriy Gusev; Raja Loganantharaj; Susan Bridges; Stephen Winters-Hilt; Jonathan D. Wren (BMC Bioinform., 2007)

The alpha-Hemolysin nanopore transduction detector - single-molecule binding studies and immunological screening of antibodies and aptamers. - Stephen Winters-Hilt (BMC Bioinform., 2007)

A novel, fast, HMM-with-Duration implementation - for application with a new, pattern recognition informed, nanopore detector. - Stephen Winters-Hilt; Carl Baribault (BMC Bioinform., 2007)

Nanopore current transduction analysis of protein binding to non-terminal and terminal DNA regions: analysis of transcription factor binding, retroviral DNA terminus dynamics, and retroviral integrase-DNA binding. - Stephen Winters-Hilt; Amanda Davis; Iftekhar Amin; Eric Morales (BMC Bioinform., 2007)

SVM clustering. - Stephen Winters-Hilt; Sam Merat (BMC Bioinform., 2007)

Nanopore-based kinetics analysis of individual antibody-channel and antibody-antigen interactions. - Stephen Winters-Hilt; Eric Morales; Iftekhar Amin; Alexander Stoyanov (BMC Bioinform., 2007)

Implementing EM and Viterbi algorithms for Hidden Markov Model in linear memory. - Alexander G. Churbanov; Stephen Winters-Hilt (BMC Bioinform., 2008)

Clustering ionic flow blockade toggles with a Mixture of HMMs. - Alexander G. Churbanov; Stephen Winters-Hilt (BMC Bioinform., 2008)

Hybrid MM/SVM structural sensors for stochastic sequential data. - Brian Roux; Stephen Winters-Hilt (BMC Bioinform., 2008)

Proceedings of the 2008 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. - Jonathan D. Wren; Dawn Wilkins; James C. Fuscoe; Susan Bridges; Stephen Winters-Hilt; Yuriy Gusev (BMC Bioinform., 2008)

A Metastate HMM with Application to Gene Structure Identification in Eukaryotes. - Stephen Winters-Hilt; Carl Baribault (EURASIP J. Adv. Signal Process., 2010)

Hidden Markov Model with Duration Side Information for Novel HMMD Derivation, with Application to Eukaryotic Gene Finding. - Stephen Winters-Hilt; Zuliang Jiang; Carl Baribault (EURASIP J. Adv. Signal Process., 2010)

A hidden Markov modelwith binned duration algorithm. - Stephen Winters-Hilt; Zuliang Jiang (IEEE Trans. Signal Process., 2010)

Single Nucleotide Polymorphism Detection via Cheminformatics Analysis of Nanopore-Blockades Engineered for Event Transduction. - Stephen Winters-Hilt (BICoB, 2011)

The NTD Nanoscope: potential applications and implementations. - Stephen Winters-Hilt; Evenie Horton-Chao; Eric Morales (BMC Bioinform., 2011)

Proceedings of the 2011 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. - Jonathan D. Wren; Doris M. Kupfer; Edward J. Perkins; Susan Bridges; Stephen Winters-Hilt; Mikhail G. Dozmorov; Ulisses M. Braga-Neto (BMC Bioinform., 2011)

Alt-Splice Gene Predictor Using Multitrack-Clique Analysis: Verification of Statistical Support for Modelling in Genomes of Multicellular Eukaryotes. - Stephen Winters-Hilt; Andrew J. Lewis (Informatics, 2017)