A Statistical Model to Identify Differentially Expressed Proteins in 2D PAGE Gels. - Steven H. Wu; Michael A. Black; Robyn A. North; Kelly R. Atkinson; Allen G. Rodrigo (PLoS Comput. Biol., 2009)

A Bayesian model for classifying all differentially expressed proteins simultaneously in 2D PAGE gels. - Steven H. Wu; Michael A. Black; Robyn A. North; Allen G. Rodrigo (BMC Bioinform., 2012)

Estimation of evolutionary parameters using short, random and partial sequences from mixed samples of anonymous individuals. - Steven H. Wu; Allen G. Rodrigo (BMC Bioinform., 2015)

Neutral Models of Microbiome Evolution. - Qinglong Zeng; Jeet Sukumaran; Steven H. Wu; Allen G. Rodrigo (PLoS Comput. Biol., 2015)

Estimating error models for whole genome sequencing using mixtures of Dirichlet-multinomial distributions. - Steven H. Wu; Rachel Schwartz; David J. Winter; Donald F. Conrad; Reed A. Cartwright (Bioinform., 2017)

accuMUlate: a mutation caller designed for mutation accumulation experiments. - David J. Winter; Steven H. Wu; Abigail A. Howell; Ricardo B. R. Azevedo; Rebecca A. Zufall; Reed A. Cartwright (Bioinform., 2018)

An assembly-free method of phylogeny reconstruction using short-read sequences from pooled samples without barcodes. - Thomas K. F. Wong; Teng Li; Louis Ranjard; Steven H. Wu; Jeet Sukumaran; Allen G. Rodrigo (PLoS Comput. Biol., 2021)

ViPRA-Haplo: De Novo Reconstruction of Viral Populations Using Paired End Sequencing Data. - Weiling Li; Raunaq Malhotra; Steven H. Wu; Manjari Jha; Allen G. Rodrigo; Mary Poss; Raj Acharya (IEEE ACM Trans. Comput. Biol. Bioinform., 2024)