FlyExpress: visual mining of spatiotemporal patterns for genes and publications in Drosophila embryogenesis. - Sudhir Kumar 001; Charlotte Konikoff; Bernard Van Emden; Christopher Busick; Kailah T. Davis; Shuiwang Ji; Lin-Wei Wu; Hector Ramos; Thomas Brody; Sethuraman Panchanathan; Jieping Ye; Timothy L. Karr; et al. (Bioinform., 2011)

Image-level and group-level models for Drosophila gene expression pattern annotation. - Qian Sun 002; Sherin Muckatira; Lei Yuan 001; Shuiwang Ji; Stuart J. Newfeld; Sudhir Kumar 001; Jieping Ye (BMC Bioinform., 2013)

A mesh generation and machine learning framework for Drosophila gene expression pattern image analysis. - Wenlu Zhang; Daming Feng; Rongjian Li; Andrey N. Chernikov; Nikos Chrisochoides; Christopher Osgood; Charlotte Konikoff; Stuart J. Newfeld; Sudhir Kumar 001; Shuiwang Ji (BMC Bioinform., 2013)

Automated annotation of developmental stages of Drosophila embryos in images containing spatial patterns of expression. - Lei Yuan 001; Cheng Pan; Shuiwang Ji; Michael McCutchan; Zhi-Hua Zhou; Stuart J. Newfeld; Sudhir Kumar 001; Jieping Ye (Bioinform., 2014)