SpectralNET - an application for spectral graph analysis and visualization. - Joshua J. Forman; Paul A. Clemons; Stuart L. Schreiber; Stephen J. Haggarty (BMC Bioinform., 2005)

Identifying Biologically Active Compound Classes Using Phenotypic Screening Data and Sampling Statistics. - Justin Klekota; Erik Brauner; Stuart L. Schreiber (J. Chem. Inf. Model., 2005)

Query Chem: a Google-powered web search combining text and chemical structures. - Justin Klekota; Frederick P. Roth; Stuart L. Schreiber (Bioinform., 2006)

Using High-Throughput Screening Data To Discriminate Compounds with Single-Target Effects from Those with Side Effects. - Justin Klekota; Erik Brauner; Frederick P. Roth; Stuart L. Schreiber (J. Chem. Inf. Model., 2006)

Ligand design by a combinatorial approach based on modeling and experiment: application to HLA-DR4. - Erik Evensen; Diane Joseph-McCarthy; Gregory A. Weiss; Stuart L. Schreiber; Martin Karplus (J. Comput. Aided Mol. Des., 2007)

ChemBank: a small-molecule screening and cheminformatics resource database. - Kathleen Petri Seiler; Gregory A. George; Mary Pat Happ; Nicole E. Bodycombe; Hyman A. Carrinski; Stephanie Norton; Steve Brudz; John P. Sullivan; Jeremy Muhlich; Martin Serrano; Paul Ferraiolo; Nicola J. Tolliday; et al. (Nucleic Acids Res., 2008)

BioAssay Research Database (BARD): chemical biology and probe-development enabled by structured metadata and result types. - E. A. Howe; Andrea de Souza; David L. Lahr; S. Chatwin; Philip Montgomery; B. R. Alexander; Dac-Trung Nguyen; Yasel Cruz; D. A. Stonich; G. Walzer; J. T. Rose; Shaita C. Picard; et al. (Nucleic Acids Res., 2015)

Differential Pathway Dependency Discovery Associated with Drug Response across Cancer Cell Lines. - Gil Speyer; Divya Mahendra; Hai J. Tran; Jeff Kiefer; Stuart L. Schreiber; Paul A. Clemons; Harshil Dhruv; Michael E. Berens; Seungchan Kim (PSB, 2017)

CTD2 Dashboard: a searchable web interface to connect validated results from the Cancer Target Discovery and Development Network. - Bülent Arman Aksoy; Vlado Dancík; Kenneth Smith 001; Jessica N. Mazerik; Zhou Ji; Benjamin E. Gross; Olga Nikolova; Nadia Jaber; Andrea Califano; Stuart L. Schreiber; Daniela S. Gerhard; Leandro Hermida; et al. (Database J. Biol. Databases Curation, 2017)

RWEN: response-weighted elastic net for prediction of chemosensitivity of cancer cell lines. - Amrita Basu; Ritwik Mitra; Han Liu 001; Stuart L. Schreiber; Paul A. Clemons (Bioinform., 2018)