Recognizing Patterns in High-Dimensional Data: Automated Histogram Filtering for Protein Structure Elucidation. - Janine Imada; Paul Chapman; Stuart M. Rothstein (HPCS, 2005)

Molecular dynamics simulation study on the structural stabilities of polyglutamine peptides. - Hajime Ogawa; Miki Nakano; Hirofumi Watanabe; E. B. Starikov; Stuart M. Rothstein; Shigenori Tanaka (Comput. Biol. Chem., 2008)

Water-mediated interactions in the CRP-cAMP-DNA complex: Does water mediate sequence-specific binding at the DNA primary-kink site? - Bryan M. B. VanSchouwen; Heather L. Gordon; Stuart M. Rothstein; Yuto Komeiji; Kaori Fukuzawa; Shigenori Tanaka (Comput. Biol. Chem., 2008)

Ground-state electronic properties of LiH calculated from the "Bounce" version of quantum Monte Carlo. - Wai Kong Yuen; Egor Ospadov; Stuart M. Rothstein (J. Comput. Sci., 2014)