RNAdb - a comprehensive mammalian noncoding RNA database. - Ken C. Pang; Stuart Stephen; Pär G. Engström; Khairina Tajul-Arifin; Weisan Chen; Claes Wahlestedt; Boris Lenhard; Yoshihide Hayashizaki; John S. Mattick (Nucleic Acids Res., 2005)

RNAdb 2.0 - an expanded database of mammalian non-coding RNAs. - Ken C. Pang; Stuart Stephen; Marcel E. Dinger; Pär G. Engström; Boris Lenhard; John S. Mattick (Nucleic Acids Res., 2007)

Delineating Slowly and Rapidly Evolving Fractions of the Drosophila Genome. - Jonathan M. Keith; Peter Adams 001; Stuart Stephen; John S. Mattick (J. Comput. Biol., 2008)