Genome-Wide Pathway Analysis and Visualization Using Gene Expression Data. - Manish P. Kurhekar; Sudeshna Adak; Suchit Jhunjhunwala; K. Raghupathy (Pacific Symposium on Biocomputing, 2002)

In silico tools for accurate HLA and KIR inference from clinical sequencing data empower immunogenetics on individual-patient and population scales. - Jieming Chen; Shravan Madireddi; Deepti Nagarkar; Maciej Migdal; Jason A. Vander Heiden; Diana Chang; Kiran Mukhyala; Suresh Selvaraj; Edward E. Kadel; Matthew J. Brauer; Sanjeev Mariathasan; Julie Hunkapiller; et al. (Briefings Bioinform., 2021)

Graph-pMHC: graph neural network approach to MHC class II peptide presentation and antibody immunogenicity. - William J. Thrift; Jason Perera; Sivan Cohen; Nicolas W. Lounsbury; Hem R. Gurung; Christopher M. Rose; Jieming Chen; Suchit Jhunjhunwala; Kai Liu (Briefings Bioinform., 2024)