A Bayesian Approach for Integrating Transcription Regulation and Gene Expression: Application to Saccharomyces Cerevisiae Cell Cycle Data. - Sudhakar Jonnalagadda; Rajagopalan Srinivasan (Systems Biology and Regulatory Genomics, 2005)

Principal components analysis based methodology to identify differentially expressed genes in time-course microarray data. - Sudhakar Jonnalagadda; Rajagopalan Srinivasan (BMC Bioinform., 2008)

NIFTI: An evolutionary approach for finding number of clusters in microarray data. - Sudhakar Jonnalagadda; Rajagopalan Srinivasan (BMC Bioinform., 2009)

Graph theory augmented math programming approach to identify minimal reaction sets in metabolic networks. - Sudhakar Jonnalagadda; Balaji Balagurunathan; Rajagopalan Srinivasan (Comput. Chem. Eng., 2011)

An efficient graph theory based method to identify every minimal reaction set in a metabolic network. - Sudhakar Jonnalagadda; Rajagopalan Srinivasan (BMC Syst. Biol., 2014)