From Proposal to Production: Lessons Learned Developing the Computational Chemistry Grid Cyberinfrastructure. - Rion Dooley; Kent F. Milfeld; Chona Guiang; Sudhakar Pamidighantam; Gabrielle Allen (J. Grid Comput., 2006)

TeraGrid Science Gateways and Their Impact on Science. - Nancy Wilkins-Diehr; Dennis Gannon; Gerhard Klimeck; Scott Oster; Sudhakar Pamidighantam (Computer, 2008)

Molecular parameter optimization gateway (ParamChem): workflow management through TeraGrid ASTA. - Jayeeta Ghosh; Suresh Marru; Nikhil Singh 008; Kenno Vanomesslaeghe; Ye Fan; Sudhakar Pamidighantam (TG, 2011)

Authoring a Science Gateway Cookbook. - Suresh Marru; Rion Dooley; Nancy Wilkins-Diehr; Marlon E. Pierce; Mark A. Miller; Sudhakar Pamidighantam; Julie Wernert (CLUSTER, 2013)

Performance Improvement and Workflow Development of Virtual Diffraction Calculations. - Shawn P. Coleman; Sudhakar Pamidighantam; Mark Van Moer; Yang Wang; Lars Koesterke; Douglas E. Spearot (XSEDE, 2014)

Incorporating Job Predictions into the SEAGrid Science Gateway. - Ye Fan; Sudhakar Pamidighantam; Warren Smith (XSEDE, 2014)

E-science infrastructures for molecular modeling and parametrization. - Ning Shen; Ye Fan; Sudhakar Pamidighantam (J. Comput. Sci., 2014)

Apache Airavata as a Laboratory: Architecture and Case Study for Component-Based Gateway Middleware. - Suresh Marru; Marlon E. Pierce; Sudhakar Pamidighantam; Chathuri Wimalasena (SCREAM@HPDC, 2015)

Publishing and consuming GLUE v2.0 resource information in XSEDE. - Warren Smith; Sudhakar Pamidighantam; John-Paul Navarro (XSEDE, 2015)

Apache Airavata: design and directions of a science gateway framework. - Marlon E. Pierce; Suresh Marru; Lahiru Gunathilake; Don Kushan Wijeratne; Raminder Singh; Chathuri Wimalasena; Shameera Ratnayaka; Sudhakar Pamidighantam (Concurr. Comput. Pract. Exp., 2015)

Community Science Exemplars in SEAGrid Science Gateway: Apache Airavata Based Implementation of Advanced Infrastructure. - Sudhakar Pamidighantam; Supun Nakandala; Eroma Abeysinghe; Chathuri Wimalasena; Shameera Rathnayaka; Suresh Marru; Marlon E. Pierce (ICCS, 2016)

Anatomy of the SEAGrid Science Gateway. - Supun Nakandala; Sudhakar Pamidighantam; Shameera Yodage; Nipurn Doshi; Eroma Abeysinghe; Chathuri Peli Kankanamalage; Suresh Marru; Marlon E. Pierce (XSEDE, 2016)

Using the Jetstream Research Cloud to provide Science Gateway resources. - Richard Knepper; Eric Coulter; Marlon E. Pierce; Suresh Marru; Sudhakar Pamidighantam (CCGrid, 2017)

Apache Airavata Sharing Service: A Tool for Enabling User Collaboration in Science Gateways. - Supun Nakandala; Suresh Marru; Marlon E. Pierce; Sudhakar Pamidighantam; Kenneth Yoshimoto; Terri Schwartz; Subhashini Sivagnanam; Amitava Majumdar 001; Mark A. Miller (PEARC, 2017)

Science Gateway Implementation at the University of South Dakota: Applications in Research and Education. - Joseph D. Madison; Eroma Abeysinghe; Sudhakar Pamidighantam; Suresh Marru; Marcus Christie; Douglas M. Jennewein; Marlon E. Pierce (PEARC, 2018)

Apache Airavata Resource Allocation System: A Tool for Allocating Resources in Science Gateways. - Harsha Phulwani; Madrina Thapa; Suresh Marru; Marlon E. Pierce; Sudhakar Pamidighantam; Marcus Christie (PEARC, 2018)

Supporting Science Gateways Using Apache Airavata and SciGaP Services. - Marlon E. Pierce; Suresh Marru; Eroma Abeysinghe; Sudhakar Pamidighantam; Marcus Christie; Dimuthu Wannipurage (PEARC, 2018)

Simplifying Access to Campus Resources at Southern Illinois University with a Science Gateway. - Sai Susheel Sunkara; Chet Langin; Marlon E. Pierce; Eroma Abeysinghe; Sudhakar Pamidighantam; Suresh Marru (PEARC, 2018)

A New Science Gateway to Provide Decision Support on Carbon Capture and Storage Technologies. - Yinzhi Wang; Sudhakar Pamidighantam; Sean Yaw; Eroma Abeysinghe; Suresh Marru; Marcus Christie; Kevin M. Ellett; Marlon E. Pierce; Richard S. Middleton (PEARC, 2018)

Towards Run Time Estimation of the Gaussian Chemistry Code for SEAGrid Science Gateway. - Angel Beltre; Shehtab Zaman; Kenneth Chiu; Sudhakar Pamidighantam; Xingye Qiao; Madhusudhan Govindaraju (PEARC, 2019)

The USD Science Gateway: A Bridge Between Research and Advanced Computing. - Adison A. Kleinsasser; Sudhakar Pamidighantam; Douglas M. Jennewein; Joseph D. Madison; Marcus Christie; Eroma Abeysinghe; Suresh Marru; Marlon E. Pierce (PEARC, 2019)

Experiences from scaling scale Science Gateway operations. - Suresh Marru; Marlon E. Pierce; Eroma Abeysinghe; Sudhakar Pamidighantam; Marcus Christie; Dimuthu Wannipurage (PEARC, 2019)

The Distant Reader: Tool for Reading. - Eric Lease Morgan; Eroma Abeysinghe; Sudhakar Pamidighantam; Eric Coulter; Suresh Marru; Marlon E. Pierce (PEARC, 2019)

Implementing a Flexible, Fault Tolerant Job Management System for Science Gateways. - Dimuthu Wannipurage; Suresh Marru; Marlon E. Pierce; Eroma Abeysinghe; Sudhakar Pamidighantam; Marcus Christie; Gourav Shenoy; Ajinkya Dhamnaskar; Lahiru Jayathilaka (PEARC, 2019)

An extensible Django-based web portal for Apache Airavata. - Marcus Christie; Suresh Marru; Eroma Abeysinghe; Dimuthu Upeksha; Sudhakar Pamidighantam; Stephen Paul Adithela; Eldho Mathulla; Aarushi Bisht; Shivam Rastogi; Marlon E. Pierce (PEARC, 2020)

FutureWater Indiana: A science gateway for spatio-temporal modeling of water in Wabash basin with a focus on climate change. - Jennifer R. Dierauer; Chen Zhu; Lei Gong; Alan Walsh; Sudhakar Pamidighantam; Jun Wang 139; Marcus Christie; Eroma Abeysinghe (PEARC, 2020)

Online Single-cell RNA-seq Data Denoising with Transfer Learning. - Bowei Kang; Eroma Abeysinghe; Divyansh Agarwal; Quanli Wang; Sudhakar Pamidighantam; Mo Huang; Nancy Ruonan Zhang; Jingshu Wang (PEARC, 2020)

A Science Gateway for Simulating the Economics of Carbon Sequestration Technologies: SimCCS2.0. - Sudhakar Pamidighantam; Jun Wang 139; Marcus Christie; Eroma Abeysinghe; Kevin M. Ellett; Ryan Kammer; Sean Yaw; Richard S. Middleton; Brendan A. Hoover (PEARC, 2020)

Atomic and Molecular Scattering Applications in an Apache Airavata Science Gateway. - Barry I. Schneider; Klaus Bartschat; Oleg Zatsarinny; Kathryn R. Hamilton; Igor Bray; Armin Scrinzi; Fernando Martin; Jesus Gonzalez Vasquez; Jonathan Tennyson; Jimena D. Gorfinkiel; Robert R. Lucchese; Sudhakar Pamidighantam (PEARC, 2020)

Managing authentication and authorization in distributed science gateway middleware. - Marcus A. Christie; Anuj Bhandar; Supun Nakandala; Suresh Marru; Eroma Abeysinghe; Sudhakar Pamidighantam; Marlon E. Pierce (Future Gener. Comput. Syst., 2020)

Accelerating complex modeling workflows in CyberWater using on-demand HPC/Cloud resources. - Feng Li 025; Ranran Chen; Yuankun Fu; Fengguang Song; Yao Liang; Isuru Ranawaka; Sudhakar Pamidighantam; Daniel Luna; Xu Liang (e-Science, 2021)

DELTA-Topology: A Science Gateway for Experimental and Computational Chemical Data Analysis using Topological Models. - Sudhakar Pamidighantam; Eric Coulter; Marcus Christie; Aurora E. Clark (PEARC, 2021)

Common Resource Descriptions for Interoperable Gateway Cyberinfrastructure. - Joe Stubbs; Suresh Marru; Daniel Mejia 003; John-Paul Navarro; Eric Franz; Steve Black; Dimuthu Wannipurage; Sudhakar Pamidighantam; Claire Stirm; Maytal Dahan; Marlon E. Pierce; Michael G. Zentner (PEARC, 2021)

CyberWater: An Open Framework for Data and Model Integration in Water Science and Engineering. - Ranran Chen; Feng Li 025; Drew Bieger; Fengguang Song; Yao Liang; Daniel Luna; Ryan Young; Xu Liang; Sudhakar Pamidighantam (CIKM, 2022)

Experiences with managing data parallel computational workflows for High-throughput Fragment Molecular Orbital (FMO) Calculations. - Dimuthu Wannipurage; Indrajit Deb; Eroma Abeysinghe; Sudhakar Pamidighantam; Suresh Marru; Marlon E. Pierce; Aaron T. Frank (CoRR, 2022)

Airavata Data Catalog: A Multi-tenant Metadata Service for Efficient Data Discovery and Access Control. - Marcus Christie; Suresh Marru; Sudhakar Pamidighantam; Isuru Ranawaka; Dimuthu Wannipurage (PEARC, 2023)

Cybershuttle: An End-to-End Cyberinfrastructure Continuum to Accelerate Discovery in Science and Engineering. - Suresh Marru; Marlon E. Pierce; Beth Plale; Sudhakar Pamidighantam; Dimuthu Wannipurage; Marcus Christie; Isuru Ranawaka; Eroma Abeysinghe; Rob Quick; Emad Tajkhorshid; Seid Koric; Jim Basney; et al. (PEARC, 2023)

Advanced Application user interfaces for time-dependent Recursive indeXing (tRecX) Code: from Design to Production Deployment. - Sudhakar Pamidighantam; Dinuka De Silva; Marcus Christie; Barry I. Schneider; Armin Scrinzi; Simran Mhatre (PEARC, 2023)

Airavata Metascheduler: A Reliable, Fault Tolerant, and Resource-Aware Job Scheduling Service. - Isuru Ranawaka; Eroma Abeysinghe; Dimuthu Wannipurage; Dinuka De Silva; Emre H. Brookes; Suresh Marru; Marcus Christie; Sudhakar Pamidighantam; Marlon E. Pierce (PEARC, 2023)

Simulation for All: The Atomic, Molecular, and Optical Science Gateway. - Kathryn R. Hamilton; Klaus Bartschat; Nicolas Douguet; Sudhakar V. Pamidighantam; Barry I. Schneider (Comput. Sci. Eng., 2023)

Asynchronous modeling workflows in CyberWater with on-demand HPC/Cloud access. - Ranran Chen; Feng Li 025; Daniel Luna; Isuru Ranawaka; Fengguang Song; Sudhakar Pamidighantam; Xu Liang; Yao Liang (Future Gener. Comput. Syst., 2024)