Docking Validation Resources: Protein Family and Ligand Flexibility Experiments. - Sudipto Mukherjee 002; Trent E. Balius; Robert C. Rizzo (J. Chem. Inf. Model., 2010)

Implementation and evaluation of a docking-rescoring method using molecular footprint comparisons. - Trent E. Balius; Sudipto Mukherjee 002; Robert C. Rizzo (J. Comput. Chem., 2011)

Evaluation of DOCK 6 as a pose generation and database enrichment tool. - Scott R. Brozell; Sudipto Mukherjee 002; Trent E. Balius; Daniel R. Roe; David A. Case; Robert C. Rizzo (J. Comput. Aided Mol. Des., 2012)

Grid-based molecular footprint comparison method for docking and de novo design: Application to HIVgp41. - Trent E. Balius; William J. Allen; Sudipto Mukherjee 002; Robert C. Rizzo (J. Comput. Chem., 2013)

DOCK 6: Impact of new features and current docking performance. - William J. Allen; Trent E. Balius; Sudipto Mukherjee 002; Scott R. Brozell; Demetri Moustakas; P. Therese Lang; David A. Case; Irwin D. Kuntz; Robert C. Rizzo (J. Comput. Chem., 2015)