Analysis of stacking overlap in nucleic acid structures: algorithm and application. - Pavan Kumar Pingali; Sukanya Halder; Debasish Mukherjee; Sankar Basu; Rahul Banerjee; Devapriya Choudhury; Dhananjay Bhattacharyya (J. Comput. Aided Mol. Des., 2014)

RNABP COGEST: a resource for investigating functional RNAs. - Sohini Bhattacharya; Shriyaa Mittal; Swati Panigrahi; Purshotam Sharma; Preethi S. P.; Rahul Paul; Sukanya Halder; Antarip Halder; Dhananjay Bhattacharyya; Abhijit Mitra (Database J. Biol. Databases Curation, 2015)

RNAHelix: computational modeling of nucleic acid structures with Watson-Crick and non-canonical base pairs. - Dhananjay Bhattacharyya; Sukanya Halder; Sankar Basu; Debasish Mukherjee; Prasun Kumar; Manju Bansal (J. Comput. Aided Mol. Des., 2017)