Cocktail Shaker: An open source drug expansion and enumeration library for peptides. - Suliman Sharif (J. Open Source Softw., 2020)

Preserving the Integrity of Empirical Force Fields. - Asuka A. Orr; Suliman Sharif; Junmei Wang; Alexander D. MacKerell Jr. (J. Chem. Inf. Model., 2022)

BioBricks.ai: A Versioned Data Registry for Life Sciences Data Assets. - Yifan Gao; Zakariyya Mughal; Jose A. Jaramillo-Villegas; Marie Corradi; Alexandre Borrel; Ben Lieberman; Suliman Sharif; John Shaffer; Karamarie Fecho; Ajay Chatrath; Alexandra Maertens; Marc A. T. Teunis; et al. (CoRR, 2024)

De novo design and bioactivity prediction of mitotic kinesin Eg5 inhibitors using MPNN and LSTM-based transfer learning. - Damilola S. Bodun; Isiaka O. Ibrahim; Mujeebat Bashiru; Rachael Oluwakamiye Abolade; Wilberforce K. Ndarawit; Adedoyin John-Joy Owolade; Temitope A. Ogunnupebi; Ibeh John Somtochukwu; Ezekiel A. Olugbogi; Katukoliya Gamage Anuththara Samadhi; Gbolahan O. Oduselu; Suliman Sharif; et al. (Comput. Biol. Medicine, 2025)