ccPDB 2.0: an updated version of datasets created and compiled from Protein Data Bank. - Piyush Agrawal; Sumeet Patiyal; Rajesh Kumar; Vinod Kumar 014; Harinder Singh; Pawan Kumar Raghav; Gajendra P. S. Raghava (Database J. Biol. Databases Curation, 2019)

PRRDB 2.0: a comprehensive database of pattern-recognition receptors and their ligands. - Dilraj Kaur; Sumeet Patiyal; Neelam Sharma; Salman Sadullah Usmani; Gajendra P. S. Raghava (Database J. Biol. Databases Curation, 2019)

Computer-aided prediction and design of IL-6 inducing peptides: IL-6 plays a crucial role in COVID-19. - Anjali Dhall; Sumeet Patiyal; Neelam Sharma; Salman Sadullah Usmani; Gajendra P. S. Raghava (Briefings Bioinform., 2021)

Computer-aided prediction of inhibitors against STAT3 for managing COVID-19 associated cytokine storm. - Anjali Dhall; Sumeet Patiyal; Neelam Sharma; Naorem Leimarembi Devi; Gajendra P. S. Raghava (Comput. Biol. Medicine, 2021)

ChAlPred: A web server for prediction of allergenicity of chemical compounds. - Neelam Sharma; Sumeet Patiyal; Anjali Dhall; Naorem Leimarembi Devi; Gajendra P. S. Raghava (Comput. Biol. Medicine, 2021)

AlgPred 2.0: an improved method for predicting allergenic proteins and mapping of IgE epitopes. - Neelam Sharma; Sumeet Patiyal; Anjali Dhall; Akshara Pande; Chakit Arora; Gajendra P. S. Raghava (Briefings Bioinform., 2021)

HLAncPred: a method for predicting promiscuous non-classical HLA binding sites. - Anjali Dhall; Sumeet Patiyal; Gajendra P. S. Raghava (Briefings Bioinform., 2022)

A deep learning-based method for the prediction of DNA interacting residues in a protein. - Sumeet Patiyal; Anjali Dhall; Gajendra P. S. Raghava (Briefings Bioinform., 2022)

IL13Pred: A method for predicting immunoregulatory cytokine IL-13 inducing peptides. - Shipra Jain; Anjali Dhall; Sumeet Patiyal; Gajendra P. S. Raghava (Comput. Biol. Medicine, 2022)

DMPPred: a tool for identification of antigenic regions responsible for inducing type 1 diabetes mellitus. - Nishant Kumar; Sumeet Patiyal; Shubham Choudhury; Ritu Tomer; Anjali Dhall; Gajendra P. S. Raghava (Briefings Bioinform., 2023)

Prediction of RNA-interacting residues in a protein using CNN and evolutionary profile. - Sumeet Patiyal; Anjali Dhall; Khushboo Bajaj; Harshita Sahu; Gajendra P. S. Raghava (Briefings Bioinform., 2023)

SalivaDB - a comprehensive database for salivary biomarkers in humans. - Akanksha Arora; Dashleen Kaur; Sumeet Patiyal; Dilraj Kaur; Ritu Tomer; Gajendra P. S. Raghava (Database J. Biol. Databases Curation, 2023)

Pfeature: A Tool for Computing Wide Range of Protein Features and Building Prediction Models. - Akshara Pande; Sumeet Patiyal; Anjali Lathwal; Chakit Arora; Dilraj Kaur; Anjali Dhall; Gaurav Mishra; Harpreet Kaur; Neelam Sharma; Shipra Jain; Salman Sadullah Usmani; Piyush Agrawal; et al. (J. Comput. Biol., 2023)

TNFepitope: A webserver for the prediction of TNF-α inducing epitopes. - Anjali Dhall; Sumeet Patiyal; Shubham Choudhury; Shipra Jain; Kashish Narang; Gajendra P. S. Raghava (Comput. Biol. Medicine, 2023)

Risk assessment of cancer patients based on HLA-I alleles, neobinders and expression of cytokines. - Anjali Dhall; Sumeet Patiyal; Harpreet Kaur; Gajendra P. S. Raghava (Comput. Biol. Medicine, 2023)

A Highly Accurate Model for Screening Prostate Cancer Using Propensity Index Panel of Ten Genes. - Shipra Jain; Kawal Preet Kaur Malhotra; Sumeet Patiyal; Gajendra Pal Singh Raghava (J. Comput. Biol., 2023)

MRSLpred - a hybrid approach for predicting multi-label subcellular localization of mRNA at the genome scale. - Shubham Choudhury; Nisha Bajiya; Sumeet Patiyal; Gajendra P. S. Raghava (Frontiers Bioinform., 2024)

A hybrid approach for predicting transcription factors. - Sumeet Patiyal; Palak Tiwari; Mohit Ghai; Aman Dhapola; Anjali Dhall; Gajendra P. S. Raghava (Frontiers Bioinform., 2024)

A method for predicting linear and conformational B-cell epitopes in an antigen from its primary sequence. - Nishant Kumar; Sadhana Tripathi; Neelam Sharma; Sumeet Patiyal; Naorem Leimarembi Devi; Gajendra P. S. Raghava (Comput. Biol. Medicine, 2024)