Database and analysis system for cDNA clones obtained from full-length enriched cDNA libraries. - Tetsuo Nishikawa; Toshio Ota; Yuri Kawai; Shizuko Ishii; Kaoru Saito; Jun-ichi Yamamoto; Ai Wakamatsu; Masashi Ozawa; Yutaka Suzuki; Sumio Sugano; Takao Isogai (Silico Biol., 2001)

FULL-malaria: a database for a full-length enriched cDNA library from human malaria parasite, Plasmodium falciparum. - Junichi Watanabe; Masahide Sasaki; Yutaka Suzuki; Sumio Sugano (Nucleic Acids Res., 2001)

HUNT: launch of a full-length cDNA database from the Helix Research Institute. - Henrik T. Yudate; Makiko Suwa; Ryotaro Irie; Hiroshi Matsui; Tetsuo Nishikawa; Yoshitaka Nakamura; Daisuke Yamaguchi; Zhang Zhi Peng; Tomoyuki Yamamoto; Keiichi Nagai; Koji Hayashi; Tetsuji Otsuki; et al. (Nucleic Acids Res., 2001)

Internal ribosome entry site-mediated translation of Smad5 in vivo: requirement for a nuclear event. - Kazuko Shiroki; Chieko Ohsawa; Natuki Sugi; Motoaki Wakiyama; Kin-ichiro Miura; Manabu Watanabe; Yutaka Suzuki; Sumio Sugano (Nucleic Acids Res., 2002)

DBTSS: DataBase of human Transcriptional Start Sites and full-length cDNAs. - Yutaka Suzuki; Riu Yamashita; Kenta Nakai; Sumio Sugano (Nucleic Acids Res., 2002)

Large-scale collection and characterization of promoters of human and mouse genes. - Yutaka Suzuki; Riu Yamashita; Matsuyuki Shirota; Yuta Sakakibara; Joe Chiba; Junko Mizushima-Sugano; Alexander E. Kel; Takahiro Arakawa; Piero Carninci; Jun Kawai; Yoshihide Hayashizaki; Toshihisa Takagi; et al. (Silico Biol., 2004)

BTSS, DataBase of Transcriptional Start Sites: progress report 2004. - Yutaka Suzuki; Riu Yamashita; Sumio Sugano; Kenta Nakai (Nucleic Acids Res., 2004)

Full-malaria 2004: an enlarged database for comparative studies of full-length cDNAs of malaria parasites, Plasmodium species. - Junichi Watanabe; Yutaka Suzuki; Masahide Sasaki; Sumio Sugano (Nucleic Acids Res., 2004)

5'SAGE: 5'-end Serial Analysis of Gene Expression database. - Yasuhiro Kasai; Shin-ichi Hashimoto; Tomoyuki Yamada; Jun Sese; Sumio Sugano; Kouji Matsushima; Shinichi Morishita (Nucleic Acids Res., 2005)

DBTSS: DataBase of Human Transcription Start Sites, progress report 2006. - Riu Yamashita; Yutaka Suzuki; Hiroyuki Wakaguri; Katsuki Tsuritani; Kenta Nakai; Sumio Sugano (Nucleic Acids Res., 2006)

AYUMS: an algorithm for completely automatic quantitation based on LC-MS/MS proteome data and its application to the analysis of signal transduction. - Ayumu Saito; Masao Nagasaki; Masaaki Oyama; Hiroko Kozuka-Hata; Kentaro Semba; Sumio Sugano; Tadashi Yamamoto; Satoru Miyano (BMC Bioinform., 2007)

H-DBAS: Alternative splicing database of completely sequenced and manually annotated full-length cDNAs based on H-Invitational. - Jun-ichi Takeda; Yutaka Suzuki; Mitsuteru Nakao; Tsuyoshi Kuroda; Sumio Sugano; Takashi Gojobori; Tadashi Imanishi (Nucleic Acids Res., 2007)

Comparasite: a database for comparative study of transcriptomes of parasites defined by full-length cDNAs. - Junichi Watanabe; Hiroyuki Wakaguri; Masahide Sasaki; Yutaka Suzuki; Sumio Sugano (Nucleic Acids Res., 2007)

UTGB/medaka: genomic resource database for medaka biology. - Budrul Ahsan; Daisuke Kobayashi; Tomoyuki Yamada; Masahiro Kasahara; Shin Sasaki; Taro L. Saito; Yukinobu Nagayasu; Koichiro Doi; Yoichiro Nakatani; Wei Qu; Tomoko Jindo; Atsuko Shimada; et al. (Nucleic Acids Res., 2008)

DBTSS: database of transcription start sites, progress report 2008. - Hiroyuki Wakaguri; Riu Yamashita; Yutaka Suzuki; Sumio Sugano; Kenta Nakai (Nucleic Acids Res., 2008)

Computation of Rank and Select Functions on Hierarchical Binary String and Its Application to Genome Mapping Problems for Short-Read DNA Sequences. - Kouichi Kimura; Yutaka Suzuki; Sumio Sugano; Asako Koike (J. Comput. Biol., 2009)

Human Gene and Protein Database (HGPD): a novel database presenting a large quantity of experiment-based results in human proteomics. - Yukio Maruyama; Ai Wakamatsu; Yoshifumi Kawamura; Kouichi Kimura; Jun-ichi Yamamoto; Tetsuo Nishikawa; Yasutomo Kisu; Sumio Sugano; Naoki Goshima; Takao Isogai; Nobuo Nomura (Nucleic Acids Res., 2009)

Full-Malaria/Parasites and Full-Arthropods: databases of full-length cDNAs of parasites and arthropods, update 2009. - Hiroyuki Wakaguri; Yutaka Suzuki; Toshiaki Katayama; Shuichi Kawashima; Eri Kibukawa; Kazushi Hiranuka; Masahide Sasaki; Sumio Sugano; Junichi Watanabe (Nucleic Acids Res., 2009)

H-DBAS: human-transcriptome database for alternative splicing: update 2010. - Jun-ichi Takeda; Yutaka Suzuki; Ryuichi Sakate; Yoshiharu Sato; Takashi Gojobori; Tadashi Imanishi; Sumio Sugano (Nucleic Acids Res., 2010)

DBTSS provides a tissue specific dynamic view of Transcription Start Sites. - Riu Yamashita; Hiroyuki Wakaguri; Sumio Sugano; Yutaka Suzuki; Kenta Nakai (Nucleic Acids Res., 2010)

Full-parasites: database of full-length cDNAs of apicomplexa parasites, 2010 update. - Josef Tuda; Arthur E. Mongan; Mohammed E. M. Tolba; Mihoko Imada; Junya Yamagishi; Xuenan Xuan; Hiroyuki Wakaguri; Sumio Sugano; Chihiro Sugimoto; Yutaka Suzuki (Nucleic Acids Res., 2011)

DBTSS: DataBase of Transcriptional Start Sites progress report in 2012. - Riu Yamashita; Sumio Sugano; Yutaka Suzuki; Kenta Nakai (Nucleic Acids Res., 2012)

DBTSS as an integrative platform for transcriptome, epigenome and genome sequence variation data. - Ayako Suzuki; Hiroyuki Wakaguri; Riu Yamashita; Shin Kawano; Katsuya Tsuchihara; Sumio Sugano; Yutaka Suzuki; Kenta Nakai (Nucleic Acids Res., 2015)

DBTSS/DBKERO for integrated analysis of transcriptional regulation. - Ayako Suzuki; Shin Kawano; Toutai Mituyama; Mikita Suyama; Yae Kanai; Katsuhiko Shirahige; Hiroyuki Sasaki; Katsushi Tokunaga; Katsuya Tsuchihara; Sumio Sugano; Kenta Nakai; Yutaka Suzuki (Nucleic Acids Res., 2018)