Exploration of Designability of Proteins Using Graph Features of Contact Maps: Beyond Lattice Models. - Sumudu P. Leelananda; Robert L. Jernigan; Andrzej Kloczkowski (RECOMB, 2015)

Fold-specific sequence scoring improves protein sequence matching. - Sumudu P. Leelananda; Andrzej Kloczkowski; Robert L. Jernigan (BMC Bioinform., 2016)

Predicting Designability of Small Proteins from Graph Features of Contact Maps. - Sumudu P. Leelananda; Robert L. Jernigan; Andrzej Kloczkowski (J. Comput. Biol., 2016)

Using NMR Chemical Shifts and Cryo-EM Density Restraints in Iterative Rosetta-MD Protein Structure Refinement. - Sumudu P. Leelananda; Steffen Lindert (J. Chem. Inf. Model., 2020)