PubChem3D: a new resource for scientists. - Evan Bolton; Jie Chen 039; Sunghwan Kim 002; Lianyi Han; Siqian He; Wenyao Shi; Vahan Simonyan; Yan Sun; Paul A. Thiessen; Jiyao Wang; Bo Yu 016; Jian Zhang 038; et al. (J. Cheminformatics, 2011)

PubChem3D: Conformer generation. - Evan Bolton; Sunghwan Kim 002; Stephen H. Bryant (J. Cheminformatics, 2011)

PubChem3D: Diversity of shape. - Evan Bolton; Sunghwan Kim 002; Stephen H. Bryant (J. Cheminformatics, 2011)

PubChem3D: Similar conformers. - Evan Bolton; Sunghwan Kim 002; Stephen H. Bryant (J. Cheminformatics, 2011)

PubChem3D: Shape compatibility filtering using molecular shape quadrupoles. - Sunghwan Kim 002; Evan Bolton; Stephen H. Bryant (J. Cheminformatics, 2011)

PubChem3D: Biologically relevant 3-D similarity. - Sunghwan Kim 002; Evan Bolton; Stephen H. Bryant (J. Cheminformatics, 2011)

Effects of multiple conformers per compound upon 3-D similarity search and bioassay data analysis. - Sunghwan Kim 002; Evan Bolton; Stephen H. Bryant (J. Cheminformatics, 2012)

PubChem3D: conformer ensemble accuracy. - Sunghwan Kim 002; Evan Bolton; Stephen H. Bryant (J. Cheminformatics, 2013)

PubChem structure-activity relationship (SAR) clusters. - Sunghwan Kim 002; Lianyi Han; Bo Yu 016; Volker Hähnke; Evan Bolton; Stephen H. Bryant (J. Cheminformatics, 2015)

PUG-SOAP and PUG-REST: web services for programmatic access to chemical information in PubChem. - Sunghwan Kim 002; Paul A. Thiessen; Evan Bolton; Stephen H. Bryant (Nucleic Acids Res., 2015)

Literature information in PubChem: associations between PubChem records and scientific articles. - Sunghwan Kim 002; Paul A. Thiessen; Tiejun Cheng; Bo Yu 016; Benjamin A. Shoemaker; Jiyao Wang; Evan Bolton; Yanli Wang; Stephen H. Bryant (J. Cheminformatics, 2016)

Similar compounds versus similar conformers: complementarity between PubChem 2-D and 3-D neighboring sets. - Sunghwan Kim 002; Evan Bolton; Stephen H. Bryant (J. Cheminformatics, 2016)

PubChem Substance and Compound databases. - Sunghwan Kim 002; Paul A. Thiessen; Evan Bolton; Jie Chen 039; Gang Fu; Asta Gindulyte; Lianyi Han; Jane He; Siqian He; Benjamin A. Shoemaker; Jiyao Wang; Bo Yu 016; et al. (Nucleic Acids Res., 2016)

PubChem chemical structure standardization. - Volker Hähnke; Sunghwan Kim 002; Evan Bolton (J. Cheminformatics, 2018)

An update on PUG-REST: RESTful interface for programmatic access to PubChem. - Sunghwan Kim 002; Paul A. Thiessen; Tiejun Cheng; Bo Yu 016; Evan Bolton (Nucleic Acids Res., 2018)

PUG-View: programmatic access to chemical annotations integrated in PubChem. - Sunghwan Kim 002; Paul A. Thiessen; Tiejun Cheng; Jian Zhang 038; Asta Gindulyte; Evan Bolton (J. Cheminformatics, 2019)

PubChem 2019 update: improved access to chemical data. - Sunghwan Kim 002; Jie Chen 039; Tiejun Cheng; Asta Gindulyte; Jia He 008; Siqian He; Qingliang Li; Benjamin A. Shoemaker; Paul A. Thiessen; Bo Yu 016; Leonid Zaslavsky; Jian Zhang 038; et al. (Nucleic Acids Res., 2019)

Database resources of the National Center for Biotechnology Information. - Eric W. Sayers; Richa Agarwala; Evan Bolton; J. Rodney Brister; Kathi Canese; Karen Clark; Ryan Connor; Nicolas Fiorini; Kathryn Funk; Timothy Hefferon; J. Bradley Holmes; Sunghwan Kim 002; et al. (Nucleic Acids Res., 2019)

Public Chemical Databases. - Sunghwan Kim 002 (Encyclopedia of Bioinformatics and Computational Biology (2), 2019)

Database resources of the National Center for Biotechnology Information. - Eric W. Sayers; Jeffrey Beck; J. Rodney Brister; Evan Bolton; Kathi Canese; Donald C. Comeau; Kathryn Funk; Anne Ketter; Sunghwan Kim 002; Avi Kimchi; Paul A. Kitts; Anatoliy Kuznetsov; et al. (Nucleic Acids Res., 2020)

Discovering and Summarizing Relationships Between Chemicals, Genes, Proteins, and Diseases in PubChem. - Leonid Zaslavsky; Tiejun Cheng; Asta Gindulyte; Siqian He; Sunghwan Kim 002; Qingliang Li; Paul A. Thiessen; Bo Yu 016; Evan Bolton (Frontiers Res. Metrics Anal., 2021)

PubChem in 2021: new data content and improved web interfaces. - Sunghwan Kim 002; Jie Chen 039; Tiejun Cheng; Asta Gindulyte; Jia He 008; Siqian He; Qingliang Li; Benjamin A. Shoemaker; Paul A. Thiessen; Bo Yu 016; Leonid Zaslavsky; Jian Zhang 038; et al. (Nucleic Acids Res., 2021)

Database resources of the National Center for Biotechnology Information. - Eric W. Sayers; Jeffrey Beck; Evan Bolton; Devon Bourexis; James R. Brister; Kathi Canese; Donald C. Comeau; Kathryn Funk; Sunghwan Kim 002; William Klimke; Aron Marchler-Bauer; Melissa J. Landrum; et al. (Nucleic Acids Res., 2021)

Database resources of the national center for biotechnology information. - Eric W. Sayers; Evan E. Bolton; J. Rodney Brister; Kathi Canese; Jessica Chan; Donald C. Comeau; Ryan Connor; Kathryn Funk; Chris Kelly; Sunghwan Kim 002; Tom Madej; Aron Marchler-Bauer; et al. (Nucleic Acids Res., 2022)

Resource Description Framework (RDF) Modeling of Named Entity Co-occurrences Derived from Biomedical Literature in the PubChemRDF. - Qingliang Li; Sunghwan Kim 002; Leonid Zaslavsky; Tiejun Cheng; Bo Yu 016; Evan E. Bolton (SWAT4HCLS, 2023)

PubChem 2023 update. - Sunghwan Kim 002; Jie Chen 039; Tiejun Cheng; Asta Gindulyte; Jia He 008; Siqian He; Qingliang Li; Benjamin A. Shoemaker; Paul A. Thiessen; Bo Yu 016; Leonid Zaslavsky; Jian Zhang 038; et al. (Nucleic Acids Res., 2023)

Database resources of the National Center for Biotechnology Information in 2023. - Eric W. Sayers; Evan E. Bolton; J. Rodney Brister; Kathi Canese; Jessica Chan; Donald C. Comeau; Catherine M. Farrell; Michael Feldgarden; Anna M. Fine; Kathryn Funk; Eneida Hatcher; Sivakumar Kannan; et al. (Nucleic Acids Res., 2023)

PubChem synonym filtering process using crowdsourcing. - Sunghwan Kim 002; Bo Yu 016; Qingliang Li; Evan E. Bolton (J. Cheminformatics, 2024)

A resource description framework (RDF) model of named entity co-occurrences in biomedical literature and its integration with PubChemRDF. - Qingliang Li; Sunghwan Kim 002; Leonid Zaslavsky; Tiejun Cheng; Bo Yu 016; Evan E. Bolton (J. Cheminformatics, 2025)