The Generation Challenge Programme comparative plant stress-responsive gene catalogue. - Samart Wanchana; Supat Thongjuea; Victor Jun M. Ulat; Mylah Anacleto; Ramil Mauleon; Matthieu G. Conte; Mathieu Rouard; Manuel Ruiz; Nandini Krishnamurthy; Kimmen Sjölander; Theo J. L. van Hintum; Richard M. Bruskiewich (Nucleic Acids Res., 2008)

RiceGeneThresher: a web-based application for mining genes underlying QTL in rice genome. - Supat Thongjuea; Vinitchan Ruanjaichon; Richard M. Bruskiewich; Apichart Vanavichit (Nucleic Acids Res., 2009)

JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles. - Elodie Portales-Casamar; Supat Thongjuea; Andrew T. Kwon; David J. Arenillas; Xiaobei Zhao; Eivind Valen; Dimas Yusuf; Boris Lenhard; Wyeth W. Wasserman; Albin Sandelin (Nucleic Acids Res., 2010)

VALERIE: Visual-based inspection of alternative splicing events at single-cell resolution. - Wei Xiong Wen; Adam J. Mead; Supat Thongjuea (PLoS Comput. Biol., 2020)