Basophile: Accurate Fragment Charge State Prediction Improves Peptide Identification Rates. - Dong Wang; Surendra Dasari; Matthew Chambers; Jerry D. Holman; Kan Chen; Daniel C. Liebler; Daniel J. Orton; Samuel O. Purvine; Matthew E. Monroe; Chang Y. Chung; Kristie L. Rose; David L. Tabb (Genom. Proteom. Bioinform., 2013)

Chapter 3. Peptide Spectrum Matching via Database Search and Spectral Library Search. - Brian Netzel; Surendra Dasari (Proteome Informatics, 2016)

Measure transcript integrity using RNA-seq data. - Liguo Wang 002; Jinfu J. Nie; Hugues Sicotte; Ying Li; Jeanette E. Eckel-Passow; Surendra Dasari; Peter T. Vedell; Poulami Barman; Liewei Wang; Richard Weinshiboum; Jin Jen; Haojie Huang; et al. (BMC Bioinform., 2016)

CircularLogo: A lightweight web application to visualize intra-motif dependencies. - Zhenqing Ye; Tao Ma; Michael Kalmbach; Surendra Dasari; Jean-Pierre A. Kocher; Liguo Wang 002 (BMC Bioinform., 2017)

Enriched phenotypes in rare variant carriers suggest pathogenic mechanisms in rare disease patients. - Lane Fitzsimmons; Maria T. Acosta; David R. Adams; Ben Afzali; Ali Al-Beshri; Eric Allenspach; Aimee Allworth; Raquel L. Alvarez; Justin Alvey; Ashley Andrews; Euan A. Ashley; Carlos A. Bacino; et al. (BioData Min., 2025)