RVboost: RNA-seq variants prioritization using a boosting method. - Chen Wang 001; Jaime I. Dávila; Saurabh Baheti; Aditya Bhagwate; Xue Wang; Jean-Pierre A. Kocher; Susan L. Slager; Andrew L. Feldman; Anne J. Novak; James R. Cerhan; E. Aubrey Thompson; Yan W. Asmann (Bioinform., 2014)

PatternCNV: a versatile tool for detecting copy number changes from exome sequencing data. - Chen Wang 001; Jared Evans; Aditya Bhagwate; Naresh Prodduturi; Vivekananda Sarangi; Mridu Middha; Hugues Sicotte; Peter T. Vedell; Steven N. Hart; Gavin R. Oliver; Jean-Pierre A. Kocher; Matthew J. Maurer; et al. (Bioinform., 2014)

Impact of post-alignment processing in variant discovery from whole exome data. - Shulan Tian; Huihuang Yan; Michael Kalmbach; Susan L. Slager (BMC Bioinform., 2016)

Comparative analysis of de novo assemblers for variation discovery in personal genomes. - Shulan Tian; Huihuang Yan; Eric W. Klee; Michael Kalmbach; Susan L. Slager (Briefings Bioinform., 2018)

UNISOM: Unified Somatic Calling and Machine Learning-based Classification Enhance the Discovery of CHIP. - Shulan Tian; W. Garrett Jenkinson; Alejandro Ferrer; Huihuang Yan; Joel A Morales-Rosado; Kevin L. Wang; Terra L. Lasho; Benjamin B. Yan; Saurabh Baheti; Janet E. Olson; Linda B. Baughn; Wei Ding; et al. (Genom. Proteom. Bioinform., 2025)