Predicting Gene-Disease Associations with Knowledge Graph Embeddings over Multiple Ontologies. - Susana Nunes; Rita Torres Sousa; Catia Pesquita (CoRR, 2021)

Hierarchical Modelling for ALS Prognosis: Predicting the Progression Towards Critical Events. - Ruben Branco; Diogo F. Soares; Andreia S. Martins; Eleonora Auletta; Eduardo N. Castanho; Susana Nunes; Filipa Serrano; Rita Torres Sousa; Catia Pesquita; Sara C. Madeira; Helena Aidos (CLEF (Working Notes), 2022)

Explaining Artificial Intelligence Predictions of Disease Progression with Semantic Similarity. - Susana Nunes; Rita Torres Sousa; Filipa Serrano; Ruben Branco; Diogo F. Soares; Andreia S. Martins; Eleonora Auletta; Eduardo N. Castanho; Sara C. Madeira; Helena Aidos; Catia Pesquita (CLEF (Working Notes), 2022)

VOWLExplain: Knowledge Graph visualization for Explainable Artificial Intelligence. - Filipa Serrano; Susana Nunes; Catia Pesquita (VOILA@ISWC, 2022)

Multi-domain knowledge graph embeddings for gene-disease association prediction. - Susana Nunes; Rita Torres Sousa; Catia Pesquita (J. Biomed. Semant., 2023)

Drug Repurposing Hypothesis Validation with Knowledge-infused Explanations. - Susana Nunes; Catia Pesquita (DAO-XAI@ECAI, 2024)

The Immunopeptidomics Ontology (ImPO). - Daniel Faria; Patrícia Eugénio; Marta Contreiras Silva; Laura Balbi; Georges Bedran; Ashwin Adrian Kallor; Susana Nunes; Aleksander Palkowski; Michal Waleron; Javier Antonio Alfaro; Catia Pesquita (Database J. Biol. Databases Curation, 2024)