A geometric-statistical approach toward neuron matching. - Suvadip Mukherjee; Saurav Basu; Barry G. Condron; Scott T. Acton (ISBI, 2012)

Neuron segmentation with level sets. - Suvadip Mukherjee; Barry G. Condron; Scott T. Acton (ACSSC, 2013)

Shape descriptors based on compressed sensing with application to neuron matching. - Rituparna Sarkar; Suvadip Mukherjee; Scott T. Acton (ACSSC, 2013)

Chasing the neurome: Segmentation and comparison of neurons. - Suvadip Mukherjee; Barry G. Condron; Scott T. Acton (EUSIPCO, 2013)

Vector field convolution medialness applied to neuron tracing. - Suvadip Mukherjee; Scott T. Acton (ICIP, 2013)

Tree2Tree2: Neuron tracing in 3D. - Suvadip Mukherjee; Saurav Basu; Barry G. Condron; Scott T. Acton (ISBI, 2013)

Social behavior analysis of Drosophila larvae via motion activity recognition. - Micah Consylman; Suvadip Mukherjee; Dipti Prasad Mukherjee; Barry G. Condron; Scott T. Acton (SSIAI, 2014)

Tracking sunflower circumnutation using affine parametric active contours. - Suvadip Mukherjee; Rituparna Sarkar; Joshua Vandenbrink; Scott T. Acton; Benjamin Blackman (SSIAI, 2014)

Oriented filters for vessel contrast enhancement with local directional evidence. - Suvadip Mukherjee; Scott T. Acton (ISBI, 2015)

Region Based Segmentation in Presence of Intensity Inhomogeneity Using Legendre Polynomials. - Suvadip Mukherjee; Scott T. Acton (IEEE Signal Process. Lett., 2015)

Dictionary Learning Level Set. - Rituparna Sarkar; Suvadip Mukherjee; Scott T. Acton (IEEE Signal Process. Lett., 2015)

Tubularity Flow Field - A Technique for Automatic Neuron Segmentation. - Suvadip Mukherjee; Barry G. Condron; Scott T. Acton (IEEE Trans. Image Process., 2015)

Lung nodule segmentation using deep learned prior based graph cut. - Suvadip Mukherjee; Xiaojie Huang; Roshni R. Bhagalia (ISBI, 2017)

Automated assessment of endometrium from transvaginal ultrasound using Deep Learned Snake. - Nitin Singhal; Suvadip Mukherjee; Christian Perrey (ISBI, 2017)

Learning to segment clustered amoeboid cells from brightfield microscopy via multi-task learning with adaptive weight selection. - Rituparna Sarkar; Suvadip Mukherjee; Elisabeth Labruyère; Jean-Christophe Olivo-Marin (ICPR, 2020)

Generalizing the Statistical Analysis of Objects' Spatial Coupling in Bioimaging. - Suvadip Mukherjee; Catalina Gonzalez-Gomez; Lydia Danglot; Thibault Lagache; Jean-Christophe Olivo-Marin (IEEE Signal Process. Lett., 2020)

Morphological Reconstruction of Detached Dendritic Spines via Geodesic Path Prediction. - Sammit Jain; Suvadip Mukherjee; Lydia Danglot; Jean-Christophe Olivo-Marin (ISBI, 2021)

A Robust and Versatile Framework to Compare Spike Detection Methods in Calcium Imaging of Neuronal Activity. - Samuel Kubler; Suvadip Mukherjee; Jean-Christophe Olivo-Marin; Thibault Lagache (ISBI, 2021)

A Min-Max Based Hyperparameter Estimation For Domain-Adapted Segmentation Of Amoeboid Cells. - Suvadip Mukherjee; Rituparna Sarkar; Elisabeth Labruyère; Jean-Christophe Olivo-Marin (ISBI, 2021)

Evaluating the Stability of Spatial Keypoints via Cluster Core Correspondence Index. - Suvadip Mukherjee; Thibault Lagache; Jean-Christophe Olivo-Marin (IEEE Trans. Image Process., 2021)

Spatial Analysis For Histopathology: A Statistical Approach. - Suvadip Mukherjee; Vannary Meas-Yedid; Marc Bokobza; Thibault Lagache; Alexandre Corthay; Jean-Christophe Olivo-Marin (ISBI, 2022)

Domain Adapted Multitask Learning for Segmenting Amoeboid Cells in Microscopy. - Suvadip Mukherjee; Rituparna Sarkar; Maria Manich; Elisabeth Labruyère; Jean-Christophe Olivo-Marin (IEEE Trans. Medical Imaging, 2023)