A First Attempt to Bring Computational Biology into Advanced High School Biology Classrooms. - Suzanne Renick Gallagher; William Coon; Kristin Donley; Abby Scott; Debra Goldberg (PLoS Comput. Biol., 2011)

Clustering Coefficients in Protein Interaction Hypernetworks. - Suzanne Renick Gallagher; Debra S. Goldberg (BCB, 2013)

Characterization of known protein complexes using k-connectivity and other topological measures. - Suzanne Renick Gallagher; Debra S. Goldberg (F1000Research, 2013)

Using 2-node hypergraph clustering coefficients to analyze disease-gene networks. - Suzanne Renick Gallagher; Micah Dombrower; Debra S. Goldberg (BCB, 2014)

Large highly connected clusters in protein-protein interaction networks. - Suzanne Renick Gallagher; Debra S. Goldberg (BCB, 2014)

GTED: Graph Traversal Edit Distance. - Ali Ebrahimpour Boroojeny; Akash Shrestha; Ali Sharifi-Zarchi; Suzanne Renick Gallagher; Süleyman Cenk Sahinalp; Hamidreza Chitsaz (RECOMB, 2018)

Graph Traversal Edit Distance and Extensions. - Ali Ebrahimpour Boroojeny; Akash Shrestha; Ali Sharifi-Zarchi; Suzanne Renick Gallagher; Süleyman Cenk Sahinalp; Hamidreza Chitsaz (J. Comput. Biol., 2020)

PyGTED: Python Application for Computing Graph Traversal Edit Distance. - Ali Ebrahimpour Boroojeny; Akash Shrestha; Ali Sharifi-Zarchi; Suzanne Renick Gallagher; Süleyman Cenk Sahinalp; Hamidreza Chitsaz (J. Comput. Biol., 2020)