MARNA: A server for multiple alignment of RNAs. - Sven Siebert; Rolf Backofen (German Conference on Bioinformatics, 2003)

Fast Detection of Common Sequence Structure Patterns in RNAs. - Rolf Backofen; Sven Siebert (SPIRE, 2004)

A New Distance Measure of RNA Ensembles and Its Application to Phylogenetic Tree Construction. - Sven Siebert; Rolf Backofen (CIBCB, 2005)

MARNA: multiple alignment and consensus structure prediction of RNAs based on sequence structure comparisons. - Sven Siebert; Rolf Backofen (Bioinform., 2005)

Common sequence structure properties and stable regions in RNA secondary structures (Sequenz-/Struktureigenschaften und stabile Regionen in RNA Sekundärstrukturen) - Sven Siebert (2006)

A Dynamic Programming Approach for Finding Common Patterns in RNAs. - Sven Siebert; Rolf Backofen (J. Comput. Biol., 2007)