Non-Negative Matrix Factorization of SWATH DIA Data Improves Global Metabolite Identification. - Diana Karaki; Sylvain Dechaumet; Annelaure Damont; Benoit Colsch; François Fenaille; Antoine Souloumiac; Etienne A. Thévenot (EUSIPCO, 2024)

mineMS2: annotation of spectral libraries with exact fragmentation patterns. - Alexis Delabrière; Coline Gianfrotta; Sylvain Dechaumet; Annelaure Damont; Thaïs Hautbergue; Pierrick Roger; Emilien L. Jamin; Olivier Puel; Christophe Junot; François Fenaille; Etienne A. Thévenot (J. Cheminformatics, 2025)