Parallel CLUSTAL W for PC Clusters. - James Cheetham; Frank K. H. A. Dehne; Sylvain Pitre; Andrew Rau-Chaplin; Peter J. Taillon (ICCSA (2), 2003)

The Cluster Editing Problem: Implementations and Experiments. - Frank K. H. A. Dehne; Michael A. Langston; Xuemei Luo; Sylvain Pitre; Peter Shaw 001; Yun Zhang 013 (IWPEC, 2006)

PIPE: a protein-protein interaction prediction engine based on the re-occurring short polypeptide sequences between known interacting protein pairs. - Sylvain Pitre; Frank K. H. A. Dehne; Albert Chan; James Cheetham; Alex Duong; Andrew Emili; Marinella Gebbia; Jack Greenblatt; Matthew Jessulat; Nevan J. Krogan; Xuemei Luo; Ashkan Golshani (BMC Bioinform., 2006)

MP-PIPE: a massively parallel protein-protein interaction prediction engine. - Andrew Schoenrock; Frank K. H. A. Dehne; James R. Green; Ashkan Golshani; Sylvain Pitre (ICS, 2011)

Binding Site Prediction for Protein-Protein Interactions and Novel Motif Discovery using Re-occurring Polypeptide Sequences. - Adam Amos-Binks; Catalin Patulea; Sylvain Pitre; Andrew Schoenrock; Yuan Gui; James R. Green; Ashkan Golshani; Frank K. H. A. Dehne (BMC Bioinform., 2011)

Efficient prediction of human protein-protein interactions at a global scale. - Andrew Schoenrock; Bahram Samanfar; Sylvain Pitre; Mohsen Hooshyar; Ke Jin; Charles A. Phillips; Hui Wang; Sadhna Phanse; Katayoun Omidi; Yuan Gui; Md Alamgir; Alex Wong 003; et al. (BMC Bioinform., 2014)

Designing anti-Zika virus peptides derived from predicted human-Zika virus protein-protein interactions. - Tom Kazmirchuk; Kevin Dick; Daniel J. Burnside; Brad Barnes; Houman Moteshareie; Maryam Hajikarimlou; Katayoun Omidi; Duale Ahmed; Andrew Low; Clara Lettl; Mohsen Hooshyar; Andrew Schoenrock; et al. (Comput. Biol. Chem., 2017)