Rival penalized competitive learning (RPCL): a topology-determining algorithm for analyzing gene expression data. - T. Murlidharan Nair; Christina L. Zheng; J. Lynn Fink; Robert O. Stuart; Michael Gribskov (Comput. Biol. Chem., 2003)

The PlantsP and PlantsT Functional Genomics Databases. - Jason H. Tchieu; Fariba Fana; J. Lynn Fink; Jeffrey Harper; T. Murlidharan Nair; R. Hannes Niedner; Douglas W. Smith; Kenneth Steube; Tobey M. Tam; Stella Veretnik; Degeng Wang; Michael Gribskov (Nucleic Acids Res., 2003)

A Database Designed to Computationally Aid an Experimental Approach to Alternative Splicing. - Christina L. Zheng; T. Murlidharan Nair; Michael Gribskov; Y. S. Kwon; Hai-Ri Li; Xiang-Dong Fu (Pacific Symposium on Biocomputing, 2004)

On selecting mRNA isoform features for profiling prostate cancer. - T. Murlidharan Nair (Comput. Biol. Chem., 2009)

Understanding heterogeneity in pregnancy-associated breast cancer. - T. Murlidharan Nair (BIBM, 2015)

Statistical and artificial neural network-based analysis to understand complexity and heterogeneity in preeclampsia. - T. Murlidharan Nair (Comput. Biol. Chem., 2018)

Building and Interpreting Artificial Neural Network Models for Biological Systems. - T. Murlidharan Nair (Artificial Neural Networks, 3rd Edition, 2021)