Human protein reference database - 2006 update. - Gopa R. Mishra; M. Suresh; K. Kumaran; N. Kannabiran; Shubha Suresh; P. Bala; K. Shivakumar; N. Anuradha; Raghunath Reddy; T. Madhan Raghavan; Shalini Menon; G. Hanumanthu; et al. (Nucleic Acids Res., 2006)

PathBuilder - open source software for annotating and developing pathway resources. - Kumaran Kandasamy; Shivakumar Keerthikumar; Rajesh Raju; T. S. Keshava Prasad; Y. L. Ramachandra; S. Sujatha Mohan; Akhilesh Pandey (Bioinform., 2009)

Human Proteinpedia: a unified discovery resource for proteomics research. - Kumaran Kandasamy; Shivakumar Keerthikumar; Renu Goel; Suresh Mathivanan; Nandini Patankar; Beema Shafreen; Santosh Renuse; Harsh Pawar; Y. L. Ramachandra; Pradip Kumar Acharya; Prathibha Ranganathan; Raghothama Chaerkady; et al. (Nucleic Acids Res., 2009)

Human Protein Reference Database - 2009 update. - T. S. Keshava Prasad; Renu Goel; Kumaran Kandasamy; Shivakumar Keerthikumar; Sameer Kumar 002; Suresh Mathivanan; Deepthi Telikicherla; Rajesh Raju; Beema Shafreen; Abhilash Venugopal; Lavanya Balakrishnan; Arivusudar Marimuthu; et al. (Nucleic Acids Res., 2009)

A comprehensive manually curated reaction map of RANKL/RANK-signaling pathway. - Rajesh Raju; Lavanya Balakrishnan; Vishalakshi Nanjappa; Mitali Bhattacharjee; Derese Getnet; Babylakshmi Muthusamy; Joji Kurian Thomas; Jyoti Sharma; B. Abdul Rahiman; H. C. Harsha; Subramanian Shankar; T. S. Keshava Prasad; et al. (Database J. Biol. Databases Curation, 2011)

NetSlim: high-confidence curated signaling maps. - Rajesh Raju; Vishalakshi Nanjappa; Lavanya Balakrishnan; Aneesha Radhakrishnan; Joji Kurian Thomas; Jyoti Sharma; Maozhen Tian; Shyam Mohan Palapetta; Tejaswini Subbannayya; Nirujogi Raja Sekhar; Babylakshmi Muthusamy; Renu Goel; et al. (Database J. Biol. Databases Curation, 2011)

TSLP signaling pathway map: a platform for analysis of TSLP-mediated signaling. - Jun Zhong; Jyoti Sharma; Rajesh Raju; Shyam Mohan Palapetta; T. S. Keshava Prasad; Tai-Chung Huang; Akinori Yoda; Jeffrey W. Tyner; Diederik van Bodegom; David M. Weinstock; Steven F. Ziegler; Akhilesh Pandey (Database J. Biol. Databases Curation, 2014)

Plasma Proteome Database as a resource for proteomics research: 2014 update. - Vishalakshi Nanjappa; Joji Kurian Thomas; Arivusudar Marimuthu; Babylakshmi Muthusamy; Aneesha Radhakrishnan; Rakesh Sharma 005; Aafaque Ahmad Khan; Lavanya Balakrishnan; Nandini A. Sahasrabuddhe; Satwant Kumar; Binit Nitinbhai Jhaveri; Kaushal Vinaykumar Sheth; et al. (Nucleic Acids Res., 2014)

Differential ligand-signaling network of CCL19/CCL21-CCR7 system. - Rajesh Raju; Sachin Gadakh; Priyanka Gopal; Bijesh George; Jayshree Advani; Sowmya Soman; T. S. Keshava Prasad; Reshmi Girijadevi (Database J. Biol. Databases Curation, 2015)

A multi-omic analysis of human naïve CD4+ T cells. - Christopher J. Mitchell; Derese Getnet; Min Sik Kim; Srinivas Manda Srikanth; Praveen Kumar; Tai-Chung Huang; Sneha M. Pinto; Nirujogi Raja Sekhar; Mio Iwasaki; Patrick G. Shaw; Xinyan Wu; Jun Zhong; et al. (BMC Syst. Biol., 2015)

CusVarDB: A tool for building customized sample-specific variant protein database from next-generation sequencing datasets. - Sandeep Kasaragod; Varshasnata Mohanty; Ankur Tyagi; Santosh Kumar Behera; Arun H. Patil; Sneha M. Pinto; T. S. Keshava Prasad; Prashant Kumar Modi; Harsha Gowda (F1000Research, 2020)

VirhostlncR: A comprehensive database to explore lncRNAs and their targets in viral infections. - Arun Kumar Sumaithangi Thatai; Shruthi Ammankallu; Rex Devasahayam Arokia Balaya; Sreelakshmi Pathappillil Soman; Mahammad Nisar; Sreeranjini Babu; Levin John; Anju George; Christy Kallely Anto; Diya Sanjeev; Mrudula Kinarulla Kandiyil; Sini S. Raj; et al. (Comput. Biol. Medicine, 2023)

Computational screening of potential anti-inflammatory leads from Jeevaneeya Rasayana plants targeting COX-2 and 5- LOX by molecular docking and dynamic simulation approaches. - Kadabagere Narayanaswamy Hemavathi; Sinosh Skariyachan; Rajesh Raju; Thottethodi Subrahmanya Keshava Prasad; Chandran S. Abhinand (Comput. Biol. Medicine, 2024)