An Efficient Algorithm for Finding Long Conserved Regions Between Genes. - Tak-Man Ma; Yuh-Dauh Lyuu; Yen-Wu Ti (CompLife, 2006)

Testing whether a digraph contains H-free k-induced subgraphs. - Hong-Yiu Lin; Yuh-Dauh Lyuu; Tak-Man Ma; Yen-Wu Ti (Theor. Comput. Sci., 2008)

Linear-time compression of 2-manifold polygon meshes into information-theoretically optimal number of bits. - Yuh-Dauh Lyuu; Tak-Man Ma; Yen-Wu Ti (Appl. Math. Comput., 2011)